RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	CLCNKB	P51801	687 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	DSG1	Q02413	1049 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	ZBTB6	Q15916	424 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	UPP1	Q16831	310 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	LLGL2	Q6P1M3	1020 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	GRAMD1C	Q8IYS0	662 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	ZSWIM2	Q8NEG5	633 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	HVCN1	Q96D96	273 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	CD320	Q9NPF0	282 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	TOPORS	Q9NS56	1045 aa	Predicted RBP	18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	SERTAD1	Q9UHV2	236 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	CD207	Q9UJ71	328 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	TMEM189-UBE2V1	I3L0A0	370 aa		18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	OGT	O15294	1046 aa		18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	CLTA	P09496	248 aa		18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	EPCAM	P16422	314 aa		18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	YARS	P54577	528 aa	Known RBP	18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	SPAG1	Q07617	926 aa		18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	L1TD1	Q5T7N2	865 aa	Known RBP	18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	ANKRD54	Q6NXT1	300 aa		18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	CRELD2	Q6UXH1	353 aa	Predicted RBP	18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	UHRF1	Q96T88	793 aa	Predicted RBP	18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	BLZF1	Q9H2G9	400 aa		18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	GOLPH3L	Q9H4A5	285 aa		18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	RXFP1	Q9HBX9	757 aa		18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	FAM13B	Q9NYF5	915 aa		18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	CPSF3	Q9UKF6	684 aa	Known RBP	18.89	■□□□□ 0.61
MBD1-221	ENST00000589867	LACTBL1	A8MY62	500 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	C2CD2L	O14523	706 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	KLRC4	O43908	158 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	NR1I2	O75469	434 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	PRPF6	O94906	941 aa	Known RBP	18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	GCNT3	O95395	438 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	GLUD2	P49448	558 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	SMAD4	Q13485	552 aa	Known RBP	18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	CUL4B	Q13620	913 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	RTP2	Q5QGT7	225 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	EPM2AIP1	Q7L775	607 aa	Predicted RBP	18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	CCDC65	Q8IXS2	484 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	MAGEF1	Q9HAY2	307 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	STK39	Q9UEW8	545 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	TUBGCP4	Q9UGJ1	667 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	CDH22	Q9UJ99	828 aa		18.88	■□□□□ 0.61
MBD1-221	ENST00000589867	TEX28	O15482	410 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	TADA2A	O75478	443 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	SLFN14	P0C7P3	912 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	ABCD1	P33897	745 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	MATR3	P43243	847 aa	Known RBP eCLIP	18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	AFM	P43652	599 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	CLCN4	P51793	760 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	NDUFA8	P51970	172 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	WNT7B	P56706	349 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	ASIC1	P78348	528 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	SMAD2	Q15796	467 aa	Known RBP	18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	KANK3	Q6NY19	840 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	DCLRE1A	Q6PJP8	1040 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	UNC13D	Q70J99	1090 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	SUSD6	Q92537	303 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	MSTO1	Q9BUK6	570 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	PLEKHA5	Q9HAU0	1116 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	MRPL17	Q9NRX2	175 aa	Known RBP	18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	ATP6V1D	Q9Y5K8	247 aa		18.87	■□□□□ 0.61
MBD1-221	ENST00000589867	MTCL1	Q9Y4B5	1905 aa	Known RBP	18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	SF3B1	O75533	1304 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
MBD1-221	ENST00000589867		A0A1W2PQ27	194 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867		A0A1W2PQ64	194 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867		A0A1W2PQD8	194 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	B3GAT3	O94766	335 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	UROD	P06132	367 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	CA8	P35219	290 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	BRCC3	P46736	316 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	ACOT2	P49753	483 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	GUCY2F	P51841	1108 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	NUCB2	P80303	420 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	USP41	Q3LFD5	358 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	PUS10	Q3MIT2	529 aa	Known RBP	18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	PRSS55	Q6UWB4	352 aa	Predicted RBP	18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	GPR65	Q8IYL9	337 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	PAGE5	Q96GU1	130 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	ACCS	Q96QU6	501 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	USP15	Q9Y4E8	981 aa	Predicted RBP	18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	PCDHB13	Q9Y5F0	798 aa		18.86	■□□□□ 0.61
MBD1-221	ENST00000589867	FSD2	A1L4K1	749 aa		18.85	■□□□□ 0.61
MBD1-221	ENST00000589867		I3L4J1	428 aa		18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	PODXL	O00592	558 aa		18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	ADAM12	O43184	909 aa		18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	RPL17	P18621	184 aa	Known RBP	18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	FGFR3	P22607	806 aa		18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	AMPD3	Q01432	767 aa		18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	FAM171A1	Q5VUB5	890 aa		18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	C12orf76	Q8N812	135 aa	Predicted RBP	18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	LNX1	Q8TBB1	728 aa	Predicted RBP	18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	RIN2	Q8WYP3	895 aa	Predicted RBP	18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	UROC1	Q96N76	676 aa		18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	CBWD1	Q9BRT8	395 aa		18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	LRRC27	Q9C0I9	530 aa		18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	RPF1	Q9H9Y2	349 aa	Known RBP	18.85	■□□□□ 0.61
MBD1-221	ENST00000589867	SLC38A7	Q9NVC3	462 aa		18.85	■□□□□ 0.61

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