RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 LRRC4Q9HBW1 653 aa15.51■□□□□ 0.07
RETREG3-208ENST00000589797 GINM1Q9NU53 330 aa15.51■□□□□ 0.07
RETREG3-208ENST00000589797 AIPL1Q9NZN9 384 aa15.51■□□□□ 0.07
RETREG3-208ENST00000589797 ATF7IP2Q5U623 682 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 C1orf228Q6PIY5 440 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 FASTKD5Q7L8L6 764 aaKnown RBP15.5■□□□□ 0.07
RETREG3-208ENST00000589797 ALS2Q96Q42 1657 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 MCF2LO15068 1137 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 ZBTB22O15209 634 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 SNED1Q8TER0 1413 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 NACA2Q9H009 215 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 TARSL2A2RTX5 802 aaKnown RBP15.5■□□□□ 0.07
RETREG3-208ENST00000589797 CYP3A4P08684 503 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 CLTAP09496 248 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 KRT3P12035 628 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 RAP1GAPP47736 663 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 FAM133BQ5BKY9 247 aaKnown RBP15.5■□□□□ 0.07
RETREG3-208ENST00000589797 LLGL2Q6P1M3 1020 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 MAP7D3Q8IWC1 876 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 CPB2Q96IY4 423 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 TRIM7Q9C029 511 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 WRAP73Q9P2S5 460 aaPredicted RBP15.5■□□□□ 0.07
RETREG3-208ENST00000589797 SCINQ9Y6U3 715 aa15.5■□□□□ 0.07
RETREG3-208ENST00000589797 ZNF142P52746 1687 aaPredicted RBP15.5■□□□□ 0.07
RETREG3-208ENST00000589797 A8MXQ7 604 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 MED7O43513 233 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 HSPA6P17066 643 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 CDH8P55286 799 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 MYL6P60660 151 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 NUGGCQ68CJ6 796 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 ANKMY2Q8IV38 441 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 PARD3BQ8TEW8 1205 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 OPTNQ96CV9 577 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 TSNARE1Q96NA8 513 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 PIN4Q9Y237 131 aaKnown RBP15.49■□□□□ 0.07
RETREG3-208ENST00000589797 PODXLO00592 558 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 EXTL3O43909 919 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 PPFIA4O75335 1185 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 ADRB2P07550 413 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 C6orf222P0C671 652 aaPredicted RBP15.49■□□□□ 0.07
RETREG3-208ENST00000589797 ZNF286BP0CG31 522 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 KYNUQ16719 465 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 JAMLQ86YT9 394 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 RHOT1Q8IXI2 618 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 OR6J1Q8NGC5 347 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 RUNDC3BQ96NL0 473 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 GOLGA4Q13439 2230 aaKnown RBP15.49■□□□□ 0.07
RETREG3-208ENST00000589797 CCNE2O96020 404 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 ITGB3P05106 788 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 RALAP11233 206 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 LONRF1Q17RB8 773 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 BTNL9Q6UXG8 535 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 ANO5Q75V66 913 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 CCDC110Q8TBZ0 833 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 MDM1Q8TC05 714 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 AFG1LQ8WV93 481 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 KRT35Q92764 455 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 TACO1Q9BSH4 297 aaKnown RBP15.49■□□□□ 0.07
RETREG3-208ENST00000589797 SMARCAD1Q9H4L7 1026 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 FRMPD4Q14CM0 1322 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 CA4P22748 312 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 EFNA5P52803 228 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 EMC1Q8N766 993 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 CHST13Q8NET6 341 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 PYROXD1Q8WU10 500 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 ASCC2Q9H1I8 757 aaPredicted RBP15.49■□□□□ 0.07
RETREG3-208ENST00000589797 WNT8AQ9H1J5 351 aa15.49■□□□□ 0.07
RETREG3-208ENST00000589797 TRPM3Q9HCF6 1732 aaPredicted RBP15.48■□□□□ 0.07
RETREG3-208ENST00000589797 TJP3O95049 919 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 TBXAS1P24557 533 aaPredicted RBP15.48■□□□□ 0.07
RETREG3-208ENST00000589797 CLK2P49760 499 aaKnown RBP15.48■□□□□ 0.07
RETREG3-208ENST00000589797 SNX16P57768 344 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 CDK17Q00537 523 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 MMGT1Q8N4V1 131 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 FHDC1Q9C0D6 1143 aaPredicted RBP15.48■□□□□ 0.07
RETREG3-208ENST00000589797 CYP39A1Q9NYL5 469 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 GOLGA8RI6L899 631 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 LCP1P13796 627 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 CHRNA3P32297 505 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 CDH6P55285 790 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 FBXO25Q8TCJ0 367 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 SCFD2Q8WU76 684 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 CFAP36Q96G28 342 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 ALG13Q9NP73 1137 aaKnown RBP15.48■□□□□ 0.07
RETREG3-208ENST00000589797 A0A087WZ62 844 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 FKBP1AP62942 108 aaKnown RBP15.48■□□□□ 0.07
RETREG3-208ENST00000589797 MEI1Q5TIA1 1274 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 NOP9Q86U38 636 aaKnown RBP15.48■□□□□ 0.07
RETREG3-208ENST00000589797 ERO1BQ86YB8 467 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 ACAP3Q96P50 834 aa15.48■□□□□ 0.07
RETREG3-208ENST00000589797 FDXACB1Q9BRP7 624 aaPredicted RBP15.48■□□□□ 0.07
RETREG3-208ENST00000589797 FNDC3AQ9Y2H6 1198 aaKnown RBP15.48■□□□□ 0.07
RETREG3-208ENST00000589797 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
RETREG3-208ENST00000589797 ALDH3A1P30838 453 aa15.47■□□□□ 0.07
RETREG3-208ENST00000589797 ARSEP51690 589 aa15.47■□□□□ 0.07
RETREG3-208ENST00000589797 CYP24A1Q07973 514 aa15.47■□□□□ 0.07
RETREG3-208ENST00000589797 ITKQ08881 620 aa15.47■□□□□ 0.07
RETREG3-208ENST00000589797 SNAPC2Q13487 334 aa15.47■□□□□ 0.07
RETREG3-208ENST00000589797 SLC29A2Q14542 456 aa15.47■□□□□ 0.07
RETREG3-208ENST00000589797 TREML2Q5T2D2 321 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms