RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 LIG4P49917 911 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 CEBPZQ03701 1054 aaKnown RBP11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 MCM6Q14566 821 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 STK38Q15208 465 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 PTPAQ15257 358 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 GLRA4Q5JXX5 417 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 ATAT1Q5SQI0 421 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 CCDC73Q6ZRK6 1079 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 CCDC149Q6ZUS6 474 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 TAS1R3Q7RTX0 852 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 ZBTB33Q86T24 672 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 MYCT1Q8N699 235 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 KRI1Q8N9T8 703 aaKnown RBP11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 TDRD5Q8NAT2 981 aaKnown RBP11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 TMEM161BQ8NDZ6 487 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 SLC22A17Q8WUG5 538 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 RIN2Q8WYP3 895 aaPredicted RBP11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 RPGRIP1Q96KN7 1286 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 ACAP3Q96P50 834 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 NTPCRQ9BSD7 190 aaKnown RBP11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 S1PR5Q9H228 398 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 MAN1C1Q9NR34 630 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 BLOC1S4Q9NUP1 217 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 FNIP2Q9P278 1114 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 USP20Q9Y2K6 914 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 SRPRBQ9Y5M8 271 aaKnown RBP11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 CLDN3O15551 220 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 XPOTO43592 962 aaKnown RBP11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 TRAPPC3O43617 180 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 TRAK2O60296 914 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 C1RP00736 705 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 PROZP22891 400 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 STAT6P42226 847 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 OSTNP61366 133 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 CACNB1Q02641 598 aaPredicted RBP11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 GRIN1Q05586 938 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 PTPN21Q16825 1174 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 RRAGBQ5VZM2 374 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 CYP26C1Q6V0L0 522 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 C15orf39Q6ZRI6 1047 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 HASPINQ8TF76 798 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 HDAC7Q8WUI4 952 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 KCNN1Q92952 543 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 DDX27Q96GQ7 796 aaKnown RBP11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 PPP1R10Q96QC0 940 aaKnown RBP11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 TTPALQ9BTX7 342 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 RXFP1Q9HBX9 757 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 PTPRHQ9HD43 1115 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 FBXO2Q9UK22 296 aaPredicted RBP11.58□□□□□ -0.56
CLPTM1-211ENST00000589347 DOCK6Q96HP0 2047 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 NPHP3-ACAD11A0A0J9YXS1 232 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 TEX28O15482 410 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 LILRB3O75022 631 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 B3GAT3O94766 335 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 PDGFBP01127 241 aaPredicted RBP11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 ZNF131P52739 623 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 PPP2R3AQ06190 1150 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 MCL1Q07820 350 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 PSMD5Q16401 504 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 ARSHQ5FYA8 562 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 LIN9Q5TKA1 542 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 FAM171A1Q5VUB5 890 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 KIAA0319Q5VV43 1072 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 SV2BQ7L1I2 683 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 HAUS6Q7Z4H7 955 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 CEP57Q86XR8 500 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 CEP120Q8N960 986 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 CMASQ8NFW8 434 aaPredicted RBP11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 PIK3R5Q8WYR1 880 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 STAMQ92783 540 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 ACSF2Q96CM8 615 aaPredicted RBP11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 HVCN1Q96D96 273 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 USP28Q96RU2 1077 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 GPR62Q9BZJ7 368 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 PLEKHA4Q9H4M7 779 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 POMKQ9H5K3 350 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 CHST7Q9NS84 486 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 CNTN3Q9P232 1028 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 SEL1LQ9UBV2 794 aa11.57□□□□□ -0.56
CLPTM1-211ENST00000589347 SMIM28A0A1B0GU29 152 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 MED19A0JLT2 244 aaPredicted RBP11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 F8W810 466 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 PODXLO00592 558 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 YEATS4O95619 227 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 EFEMP2O95967 443 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 PIGRP01833 764 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 KCNE1P15382 129 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 GAP43P17677 238 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 SCN1AP35498 2009 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 DDIT3P35638 169 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 NASPP49321 788 aaPredicted RBP11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 SLC39A14Q15043 492 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 NAB2Q15742 525 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 XKR4Q5GH76 650 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 SPECC1Q5M775 1068 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 FAM173BQ6P4H8 233 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 DCLRE1AQ6PJP8 1040 aa11.56□□□□□ -0.56
CLPTM1-211ENST00000589347 TMC5Q6UXY8 1006 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms