RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 DUSP9Q99956 384 aaKnown RBP20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 ASB7Q9H672 318 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 GOLGA2P5Q9HBQ8 144 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 PDE11AQ9HCR9 933 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 BICDL2A1A5D9 508 aa20.59■□□□□ 0.89
CLPTM1-209ENST00000588855 CASTOR2A6NHX0 329 aa20.59■□□□□ 0.89
CLPTM1-209ENST00000588855 SLC11A1P49279 550 aa20.59■□□□□ 0.89
CLPTM1-209ENST00000588855 BCAR1P56945 870 aa20.59■□□□□ 0.89
CLPTM1-209ENST00000588855 CYP24A1Q07973 514 aa20.59■□□□□ 0.89
CLPTM1-209ENST00000588855 TUSC3Q13454 348 aa20.59■□□□□ 0.89
CLPTM1-209ENST00000588855 ZC3H3Q8IXZ2 948 aaKnown RBP20.59■□□□□ 0.89
CLPTM1-209ENST00000588855 EFCAB13Q8IY85 973 aa20.59■□□□□ 0.89
CLPTM1-209ENST00000588855 TMEM130Q8N3G9 435 aa20.59■□□□□ 0.89
CLPTM1-209ENST00000588855 TUBGCP4Q9UGJ1 667 aa20.59■□□□□ 0.89
CLPTM1-209ENST00000588855 AKAP3O75969 853 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 FKBP3Q00688 224 aaKnown RBP20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 STX1AQ16623 288 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 EPC2Q52LR7 807 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 KCNT2Q6UVM3 1135 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 FAM84AQ96KN4 292 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 ZNF558Q96NG5 402 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 MED15Q96RN5 788 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 PAAF1Q9BRP4 392 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 TTYH1Q9H313 450 aaPredicted RBP20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 ZNF576Q9H609 170 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 SLC38A7Q9NVC3 462 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 DACH1Q9UI36 760 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 RWDD2AQ9UIY3 292 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 FRMD4BQ9Y2L6 1034 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 RWDD3Q9Y3V2 267 aa20.58■□□□□ 0.89
CLPTM1-209ENST00000588855 SYCE3A1L190 88 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 NT5C1B-RDH14C9J2C7 533 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 CETN3O15182 167 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 GALTP07902 379 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 BMPR1AP36894 532 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 OR1G1P47890 313 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 TYRO3Q06418 890 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 HSP90AA2PQ14568 343 aaPredicted RBP20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 TMEM132DQ14C87 1099 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 ZBTB6Q15916 424 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 FOXR2Q6PJQ5 311 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 PLEKHO2Q8TD55 490 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 ARNTL2Q8WYA1 636 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 RABGGTAQ92696 567 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 MFSD14AQ96MC6 490 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 SAMD11Q96NU1 681 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 TMEM175Q9BSA9 504 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 AAASQ9NRG9 546 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 ANO10Q9NW15 660 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 PRG3Q9Y2Y8 225 aaPredicted RBP20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 DERAQ9Y315 318 aa20.58■□□□□ 0.88
CLPTM1-209ENST00000588855 MYO9BQ13459 2157 aa20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 PTPRJQ12913 1337 aa20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 TMEM265A0A087WTH1 108 aa20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 EPOPA6NHQ4 379 aa20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 FXR1P51114 621 aaKnown RBP eCLIP20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 GUCY2FP51841 1108 aa20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 PSMD6Q15008 389 aa20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 LMBRD2Q68DH5 695 aaPredicted RBP20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 C11orf57Q6ZUT1 292 aaPredicted RBP20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 TMEM173Q86WV6 379 aaPredicted RBP20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 FAM186BQ8IYM0 893 aa20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 CCDC127Q96BQ5 260 aa20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 GZF1Q9H116 711 aaPredicted RBP20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 UBQLN1Q9UMX0 589 aaKnown RBP20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 C2CD2Q9Y426 696 aa20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 PCDHB12Q9Y5F1 795 aa20.57■□□□□ 0.88
CLPTM1-209ENST00000588855 C5orf67F2Z3F1 127 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 F8W810 466 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 NRP1O14786 923 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 DLATP10515 647 aaKnown RBP20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 PSMC2P35998 433 aaKnown RBP20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 ALDH7A1P49419 539 aaKnown RBP20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 ZSCAN23Q3MJ62 389 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 ZNF697Q5TEC3 545 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 SLC39A11Q8N1S5 342 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 CSGALNACT2Q8N6G5 542 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 KLHL23Q8NBE8 558 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 FBXO22Q8NEZ5 403 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 BCL7CQ8WUZ0 217 aaPredicted RBP20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 TSPAN18Q96SJ8 248 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 MARCH5Q9NX47 278 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 FAN1Q9Y2M0 1017 aa20.56■□□□□ 0.88
CLPTM1-209ENST00000588855 MAPK13O15264 365 aa20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 XPOTO43592 962 aaKnown RBP20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 LETM1O95202 739 aaPredicted RBP20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 ALDH2P05091 517 aa20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 ERCC5P28715 1186 aaPredicted RBP20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 CLCNKBP51801 687 aa20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 TFAMQ00059 246 aaKnown RBP20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 SURF1Q15526 300 aa20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 SPATA1Q5VX52 437 aa20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 FNBP1Q96RU3 617 aa20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 POP1Q99575 1024 aaKnown RBP20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 CGRRF1Q99675 332 aa20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 MKNK1Q9BUB5 465 aa20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 PLVAPQ9BX97 442 aa20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 DNAJC25Q9H1X3 360 aa20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 ATG2AQ2TAZ0 1938 aa20.55■□□□□ 0.88
CLPTM1-209ENST00000588855 SLC16A3O15427 465 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms