RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 LCHNA4D1U4 455 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 TRAPPC3O43617 180 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 STX10O60499 249 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 ZC3H11AO75152 810 aaKnown RBP eCLIP9.83□□□□□ -0.84
CIRBP-218ENST00000588344 GALTP07902 379 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 EPB41P11171 864 aaKnown RBP9.83□□□□□ -0.84
CIRBP-218ENST00000588344 MYOGP15173 224 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 CD44P16070 742 aaKnown RBP9.83□□□□□ -0.84
CIRBP-218ENST00000588344 LRPAP1P30533 357 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 GATMP50440 423 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 AFF1P51825 1210 aaKnown RBP9.83□□□□□ -0.84
CIRBP-218ENST00000588344 BCAR1P56945 870 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 MCCD1P59942 119 aaPredicted RBP9.83□□□□□ -0.84
CIRBP-218ENST00000588344 CYP24A1Q07973 514 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 TMEM132DQ14C87 1099 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 STX1AQ16623 288 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 EPC2Q52LR7 807 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 SEZ6Q53EL9 994 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 ZBTB41Q5SVQ8 909 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 ZNF697Q5TEC3 545 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 SPATA1Q5VX52 437 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 CEP135Q66GS9 1140 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 KLHL10Q6JEL2 608 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 PDE12Q6L8Q7 609 aaKnown RBP9.83□□□□□ -0.84
CIRBP-218ENST00000588344 TTI2Q6NXR4 508 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 WDR49Q8IV35 697 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 ZC3H3Q8IXZ2 948 aaKnown RBP9.83□□□□□ -0.84
CIRBP-218ENST00000588344 COLGALT2Q8IYK4 626 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 CSGALNACT2Q8N6G5 542 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 COLGALT1Q8NBJ5 622 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 RDH13Q8NBN7 331 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 NOC3LQ8WTT2 800 aaKnown RBP9.83□□□□□ -0.84
CIRBP-218ENST00000588344 KIF12Q96FN5 646 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 MIOSQ9NXC5 875 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 LMCD1Q9NZU5 365 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 LZTS1Q9Y250 596 aa9.83□□□□□ -0.84
CIRBP-218ENST00000588344 CEP290O15078 2479 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 TTC3P53804 2025 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 SCN5AQ14524 2016 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 TET1Q8NFU7 2136 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 LAMA2P24043 3122 aaKnown RBP9.82□□□□□ -0.84
CIRBP-218ENST00000588344 ARHGEF37A1IGU5 675 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 GOLGA8IPA6NC78 632 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 GOLGA8JA6NMD2 632 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 H3BNC9 293 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 TMEM189-UBE2V1I3L0A0 370 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 NRP1O14786 923 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 TADA2AO75478 443 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 DDHD2O94830 711 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 TNNC2P02585 160 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 TNNI1P19237 187 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 GTF2H1P32780 548 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 CTNNB1P35222 781 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 OR1G1P47890 313 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 CLDN10P78369 228 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 ELAVL2Q12926 359 aaKnown RBP9.82□□□□□ -0.84
CIRBP-218ENST00000588344 NAB2Q15742 525 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 PTPROQ16827 1216 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 UPP1Q16831 310 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 TPD52L1Q16890 204 aaPredicted RBP9.82□□□□□ -0.84
CIRBP-218ENST00000588344 JADE1Q6IE81 842 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 FRMD5Q7Z6J6 570 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 ZNF280BQ86YH2 543 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 CBWD2Q8IUF1 395 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 FAM114A1Q8IWE2 563 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 FAM186BQ8IYM0 893 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 FBXO22Q8NEZ5 403 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 ENOX1Q8TC92 643 aaKnown RBP9.82□□□□□ -0.84
CIRBP-218ENST00000588344 PARD3BQ8TEW8 1205 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 TMEM169Q96HH4 297 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 ANKRD36BP1Q96IX9 119 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 ZMAT2Q96NC0 199 aaKnown RBP9.82□□□□□ -0.84
CIRBP-218ENST00000588344 ANP32EQ9BTT0 268 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 LMAN2LQ9H0V9 348 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 CTNND2Q9UQB3 1225 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 SSX2IPQ9Y2D8 614 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 COL4A6Q14031 1691 aa9.82□□□□□ -0.84
CIRBP-218ENST00000588344 AKAP3O75969 853 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 B3GAT3O94766 335 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 TMEM191BP0C7N4 346 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 PNPLA4P41247 253 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 VAMP7P51809 220 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 RBP5P82980 135 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 TFAMQ00059 246 aaKnown RBP9.81□□□□□ -0.84
CIRBP-218ENST00000588344 TYRO3Q06418 890 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 BFSP1Q12934 665 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 DPCR1Q3MIW9 517 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 DDX53Q86TM3 631 aaKnown RBP9.81□□□□□ -0.84
CIRBP-218ENST00000588344 GPR65Q8IYL9 337 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 SLC39A11Q8N1S5 342 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 KLHL23Q8NBE8 558 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 ARNTL2Q8WYA1 636 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 IGSF21Q96ID5 467 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 CGRRF1Q99675 332 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 DUSP9Q99956 384 aaKnown RBP9.81□□□□□ -0.84
CIRBP-218ENST00000588344 BPIFA3Q9BQP9 254 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 C17orf80Q9BSJ5 609 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 SRRTQ9BXP5 876 aaKnown RBP9.81□□□□□ -0.84
CIRBP-218ENST00000588344 THAP9Q9H5L6 903 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 PDE11AQ9HCR9 933 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms