RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 SNX1Q13596 522 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 CLEC16AQ2KHT3 1053 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 TRMT1LQ7Z2T5 733 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 TRPM8Q7Z2W7 1104 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 MAP4K3Q8IVH8 894 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 DHX38Q92620 1227 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 LPAR1Q92633 364 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 ARHGEF2Q92974 986 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 MYCBPQ99417 103 aaPredicted RBP18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 KIAA1683Q9H0B3 1180 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 ANAPC7Q9UJX3 599 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 IVDP26440 423 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 MAPK4P31152 587 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 IRX3P78415 501 aaPredicted RBP18■□□□□ 0.47
PRKCSH-205ENST00000587327 SF3A3Q12874 501 aaKnown RBP eCLIP18■□□□□ 0.471e-6■■■■■ 29.6
PRKCSH-205ENST00000587327 TNFAIP1Q13829 316 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 PREPLQ4J6C6 727 aaPredicted RBP18■□□□□ 0.47
PRKCSH-205ENST00000587327 WLSQ5T9L3 541 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 SYDE1Q6ZW31 735 aaPredicted RBP18■□□□□ 0.47
PRKCSH-205ENST00000587327 MCF2L2Q86YR7 1114 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 TMC2Q8TDI7 906 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 MFSD14AQ96MC6 490 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 CHST7Q9NS84 486 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 ASIC3Q9UHC3 531 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 SNX3O60493 162 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 GTF2H1P32780 548 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 CHKAP35790 457 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 NPTX2P47972 431 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 PSMC5P62195 406 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 ELF3P78545 371 aaPredicted RBP18■□□□□ 0.47
PRKCSH-205ENST00000587327 GHRHRQ02643 423 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 SNF8Q96H20 258 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 FBXL18Q96ME1 805 aa18■□□□□ 0.47
PRKCSH-205ENST00000587327 TOPORSQ9NS56 1045 aaPredicted RBP18■□□□□ 0.47
PRKCSH-205ENST00000587327 TTC4O95801 387 aa17.99■□□□□ 0.47
PRKCSH-205ENST00000587327 SCP2P22307 547 aa17.99■□□□□ 0.47
PRKCSH-205ENST00000587327 MAN1A1P33908 653 aa17.99■□□□□ 0.47
PRKCSH-205ENST00000587327 PTK6Q13882 451 aa17.99■□□□□ 0.47
PRKCSH-205ENST00000587327 XKR9Q5GH70 373 aa17.99■□□□□ 0.47
PRKCSH-205ENST00000587327 SV2AQ7L0J3 742 aa17.99■□□□□ 0.47
PRKCSH-205ENST00000587327 OTUD6AQ7L8S5 288 aa17.99■□□□□ 0.47
PRKCSH-205ENST00000587327 MAIP1Q8WWC4 291 aa17.99■□□□□ 0.47
PRKCSH-205ENST00000587327 KIFC3Q9BVG8 833 aa17.99■□□□□ 0.47
PRKCSH-205ENST00000587327 TMEM120BA0PK00 339 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 DENND3A2RUS2 1198 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 UNGP13051 313 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 RPS12P25398 132 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 ATP5DP30049 168 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 DMP1Q13316 513 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 LRRC14Q15048 493 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 PLA2G4FQ68DD2 849 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 SAMD7Q7Z3H4 446 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 USP37Q86T82 979 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 RPAINQ86UA6 219 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 DYDC1Q8WWB3 177 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 ATG4AQ8WYN0 398 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 ELMO3Q96BJ8 720 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 FAM81BQ96LP2 452 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 TACO1Q9BSH4 297 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 SLC38A10Q9HBR0 1119 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 ANKEF1Q9NU02 776 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 OAS1P00973 400 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 KRT5P13647 590 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 SLC1A1P43005 524 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 GMPSP49915 693 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 GCNT1Q02742 428 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 HIBCHQ6NVY1 386 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 VSTM1Q6UX27 236 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 ENOSF1Q7L5Y1 443 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 MICALL2Q8IY33 904 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 MCOLN2Q8IZK6 566 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 CPXCR1Q8N123 301 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 SYTL5Q8TDW5 730 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 GRK7Q8WTQ7 553 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 SCLT1Q96NL6 688 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 TRIM7Q9C029 511 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 RAVER2Q9HCJ3 691 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 AVENQ9NQS1 362 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 DOCK1Q14185 1865 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 MROH7Q68CQ1 1323 aa17.98■□□□□ 0.47
PRKCSH-205ENST00000587327 PARP14Q460N5 1801 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 ATP9AO75110 1047 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 GAS8O95995 478 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 CREB1P16220 341 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 ITGA8P53708 1063 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 CAV1Q03135 178 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 CYP24A1Q07973 514 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 KYNUQ16719 465 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 SLC39A4Q6P5W5 647 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 CEP57Q86XR8 500 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 NTPCRQ9BSD7 190 aaKnown RBP17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 HERPUD2Q9BSE4 406 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 DCLK3Q9C098 648 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 ABCF3Q9NUQ8 709 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 ZNFX1Q9P2E3 1918 aaKnown RBP17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 WDR64B1ANS9 1081 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 TCP11X1B4DZS4 312 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 TCEA3O75764 348 aa17.97■□□□□ 0.47
PRKCSH-205ENST00000587327 CCNE2O96020 404 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms