RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 ZNF516Q92618 1163 aa13.66□□□□□ -0.22
DNMT1-208ENST00000586667 C18orf25Q96B23 403 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-208ENST00000586667 CCDC127Q96BQ5 260 aa13.66□□□□□ -0.22
DNMT1-208ENST00000586667 RNPC3Q96LT9 517 aaKnown RBP13.66□□□□□ -0.22
DNMT1-208ENST00000586667 SLC9A7Q96T83 725 aa13.66□□□□□ -0.22
DNMT1-208ENST00000586667 POP1Q99575 1024 aaKnown RBP13.66□□□□□ -0.22
DNMT1-208ENST00000586667 CGRRF1Q99675 332 aa13.66□□□□□ -0.22
DNMT1-208ENST00000586667 UBE2OQ9C0C9 1292 aaKnown RBP13.66□□□□□ -0.22
DNMT1-208ENST00000586667 TMEM117Q9H0C3 514 aa13.66□□□□□ -0.22
DNMT1-208ENST00000586667 ASB7Q9H672 318 aa13.66□□□□□ -0.22
DNMT1-208ENST00000586667 TBC1D13Q9NVG8 400 aa13.66□□□□□ -0.22
DNMT1-208ENST00000586667 ARMCX3Q9UH62 379 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-208ENST00000586667 C2CD2Q9Y426 696 aa13.66□□□□□ -0.22
DNMT1-208ENST00000586667 PCDHB7Q9Y5E2 793 aa13.66□□□□□ -0.22
DNMT1-208ENST00000586667 GNA14O95837 355 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 ATP2A2P16615 1042 aaKnown RBP13.65□□□□□ -0.22
DNMT1-208ENST00000586667 EEF1GP26641 437 aaKnown RBP13.65□□□□□ -0.22
DNMT1-208ENST00000586667 VAMP7P51809 220 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 GUCY2FP51841 1108 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 YARSP54577 528 aaKnown RBP13.65□□□□□ -0.22
DNMT1-208ENST00000586667 KRT31Q15323 416 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 TCP11X2Q5H9J9 407 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 NOMO2Q5JPE7 1267 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 WDR49Q8IV35 697 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-208ENST00000586667 MTMR12Q9C0I1 747 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 UBN1Q9NPG3 1134 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 CACNG4Q9UBN1 327 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 INPP5FQ9Y2H2 1132 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 DERAQ9Y315 318 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 SLC4A7Q9Y6M7 1214 aa13.65□□□□□ -0.22
DNMT1-208ENST00000586667 TSC2P49815 1807 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 LCHNA4D1U4 455 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 HOXA2O43364 376 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 ARHGEF15O94989 841 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 UPP2O95045 317 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 FGFR1OPO95684 399 aaKnown RBP13.64□□□□□ -0.23
DNMT1-208ENST00000586667 POMCP01189 267 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 DLATP10515 647 aaKnown RBP13.64□□□□□ -0.23
DNMT1-208ENST00000586667 GRIK3Q13003 919 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 HSP90AA2PQ14568 343 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-208ENST00000586667 TMEM132DQ14C87 1099 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 TPD52L1Q16890 204 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-208ENST00000586667 CCDC40Q4G0X9 1142 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 CBWD6Q4V339 395 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 CBWD3Q5JTY5 395 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 CBWD5Q5RIA9 395 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 TDRD10Q5VZ19 366 aaKnown RBP13.64□□□□□ -0.23
DNMT1-208ENST00000586667 FAM117BQ6P1L5 589 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 ZNF280BQ86YH2 543 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 CD302Q8IX05 232 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 PHOSPHO2Q8TCD6 241 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 KIF12Q96FN5 646 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 GOLGA2P5Q9HBQ8 144 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 METTL14Q9HCE5 456 aaKnown RBP13.64□□□□□ -0.23
DNMT1-208ENST00000586667 INTS13Q9NVM9 706 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 LIMA1Q9UHB6 759 aaKnown RBP13.64□□□□□ -0.23
DNMT1-208ENST00000586667 SIX4Q9UIU6 781 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 LRFN2Q9ULH4 789 aa13.64□□□□□ -0.23
DNMT1-208ENST00000586667 CDH23Q9H251 3354 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 TRANK1O15050 2925 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 TBKBP1A7MCY6 615 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 SMTNL1A8MU46 457 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 GRXCR1A8MXD5 290 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 PPEF2O14830 753 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 DDHD2O94830 711 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 VNN1O95497 513 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 IGFBP6P24592 240 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-208ENST00000586667 ZACNQ401N2 412 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 PAN2Q504Q3 1202 aaKnown RBP13.63□□□□□ -0.23
DNMT1-208ENST00000586667 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-208ENST00000586667 FAM114A1Q8IWE2 563 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 CMTR2Q8IYT2 770 aaKnown RBP13.63□□□□□ -0.23
DNMT1-208ENST00000586667 LRRC43Q8N309 656 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 C1orf127Q8N9H9 656 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 RSPH1Q8WYR4 309 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 RPS6KC1Q96S38 1066 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 PAAF1Q9BRP4 392 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 MTIF3Q9H2K0 278 aaKnown RBP13.63□□□□□ -0.23
DNMT1-208ENST00000586667 TAB2Q9NYJ8 693 aa13.63□□□□□ -0.23
DNMT1-208ENST00000586667 MRPL42Q9Y6G3 142 aaKnown RBP13.63□□□□□ -0.23
DNMT1-208ENST00000586667 BECN2A8MW95 431 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 F8W810 466 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 AP5Z1O43299 807 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 C4BPAP04003 597 aaKnown RBP13.62□□□□□ -0.23
DNMT1-208ENST00000586667 KRT13P13646 458 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 GCLMP48507 274 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 RABGGTBP53611 331 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 TFAMQ00059 246 aaKnown RBP13.62□□□□□ -0.23
DNMT1-208ENST00000586667 SURF1Q15526 300 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 MAN2A1Q16706 1144 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 CD300LGQ6UXG3 332 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 SV2AQ7L0J3 742 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 SPRED2Q7Z698 418 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 NT5DC4Q86YG4 428 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 COLGALT2Q8IYK4 626 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 TDHQ8IZJ6 230 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 C3orf58Q8NDZ4 430 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms