RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 LNX1Q8TBB1 728 aaPredicted RBP12.3□□□□□ -0.44
ACTN4-209ENST00000586538 B3GALT6Q96L58 329 aa12.3□□□□□ -0.44
ACTN4-209ENST00000586538 SNX27Q96L92 541 aa12.3□□□□□ -0.44
ACTN4-209ENST00000586538 PAAF1Q9BRP4 392 aa12.3□□□□□ -0.44
ACTN4-209ENST00000586538 TARS2Q9BW92 718 aaKnown RBP12.3□□□□□ -0.44
ACTN4-209ENST00000586538 OXCT2Q9BYC2 517 aaPredicted RBP12.3□□□□□ -0.44
ACTN4-209ENST00000586538 KCNK12Q9HB15 430 aa12.3□□□□□ -0.44
ACTN4-209ENST00000586538 PARVGQ9HBI0 331 aa12.3□□□□□ -0.44
ACTN4-209ENST00000586538 MTRRQ9UBK8 725 aa12.3□□□□□ -0.44
ACTN4-209ENST00000586538 FBXL21Q9UKT6 434 aa12.3□□□□□ -0.44
ACTN4-209ENST00000586538 BACE2Q9Y5Z0 518 aa12.3□□□□□ -0.44
ACTN4-209ENST00000586538 ZNF318Q5VUA4 2279 aa12.3□□□□□ -0.44
ACTN4-209ENST00000586538 MUC6Q6W4X9 2439 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 C2orf16Q68DN1 1984 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 CITO14578 2027 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 ARHGEF37A1IGU5 675 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 PODXLO00592 558 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 HNRNPDLO14979 420 aaKnown RBP12.29□□□□□ -0.44
ACTN4-209ENST00000586538 RFPL2O75678 378 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 CD2BP2O95400 341 aaKnown RBP12.29□□□□□ -0.44
ACTN4-209ENST00000586538 EDN1P05305 212 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 ASGR2P07307 311 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 C8AP07357 584 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 MAPTP10636 758 aaKnown RBP12.29□□□□□ -0.44
ACTN4-209ENST00000586538 PDIA4P13667 645 aaKnown RBP12.29□□□□□ -0.44
ACTN4-209ENST00000586538 RFX1P22670 979 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 PAX3P23760 479 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 AVPR2P30518 371 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 ELF1P32519 619 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 LIG4P49917 911 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 NCKAP1LP55160 1127 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 OSTNP61366 133 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 NHLH1Q02575 133 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 PPP2R3AQ06190 1150 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 CUL4AQ13619 759 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 RAB33AQ14088 237 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 PRSS55Q6UWB4 352 aaPredicted RBP12.29□□□□□ -0.44
ACTN4-209ENST00000586538 ALKAL1Q6UXT8 129 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 KCNK18Q7Z418 384 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 GPBP1Q86WP2 473 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 CD302Q8IX05 232 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 KRI1Q8N9T8 703 aaKnown RBP12.29□□□□□ -0.44
ACTN4-209ENST00000586538 APPL2Q8NEU8 664 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 LARP4BQ92615 738 aaKnown RBP12.29□□□□□ -0.44
ACTN4-209ENST00000586538 INTS4Q96HW7 963 aaKnown RBP12.29□□□□□ -0.44
ACTN4-209ENST00000586538 PNMA5Q96PV4 448 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 MAFFQ9ULX9 164 aa12.29□□□□□ -0.44
ACTN4-209ENST00000586538 SFI1A8K8P3 1242 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 K7ENM7 598 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 CLTAP09496 248 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 HARSP12081 509 aaKnown RBP12.28□□□□□ -0.44
ACTN4-209ENST00000586538 RPL17P18621 184 aaKnown RBP12.28□□□□□ -0.44
ACTN4-209ENST00000586538 FSHRP23945 695 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 CLCN5P51795 746 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 MCL1Q07820 350 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 RAD51AP2Q09MP3 1159 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 SF3A1Q15459 793 aaKnown RBP12.28□□□□□ -0.44
ACTN4-209ENST00000586538 ZNF280DQ6N043 979 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 KANK3Q6NY19 840 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 MTSS1LQ765P7 747 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 GET4Q7L5D6 327 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-209ENST00000586538 HAUS6Q7Z4H7 955 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 MYCT1Q8N699 235 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 RABGGTAQ92696 567 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 ZNF707Q96C28 371 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-209ENST00000586538 RTP3Q9BQQ7 232 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 CLSTN3Q9BQT9 956 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 POLD4Q9HCU8 107 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 WNT16Q9UBV4 365 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 STK17AQ9UEE5 414 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 UBQLN1Q9UMX0 589 aaKnown RBP12.28□□□□□ -0.44
ACTN4-209ENST00000586538 USP20Q9Y2K6 914 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 CDY1Q9Y6F8 540 aa12.28□□□□□ -0.44
ACTN4-209ENST00000586538 KMT2EQ8IZD2 1858 aa12.27□□□□□ -0.44
ACTN4-209ENST00000586538 TRAK2O60296 914 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 LRG1P02750 347 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 SPATA31D3P0C874 917 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 SRFP11831 508 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 CYP3A5P20815 502 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 MARCKSP29966 332 aaPredicted RBP12.27□□□□□ -0.45
ACTN4-209ENST00000586538 MCM4P33991 863 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 OR1D2P34982 312 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 ZNF131P52739 623 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 AXDND1Q5T1B0 1012 aaPredicted RBP12.27□□□□□ -0.45
ACTN4-209ENST00000586538 TPGS2Q68CL5 300 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 ASTLQ6HA08 431 aaPredicted RBP12.27□□□□□ -0.45
ACTN4-209ENST00000586538 SLC8B1Q6J4K2 584 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 SPATA31D4Q6ZUB0 917 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 TAS1R3Q7RTX0 852 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 ELMOD1Q8N336 334 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 CEP120Q8N960 986 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 SLC7A14Q8TBB6 771 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 RAD54LQ92698 747 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 PLIN2Q99541 437 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 REEP2Q9BRK0 252 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 CCSER1Q9C0I3 900 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 ZSCAN16Q9H4T2 348 aaPredicted RBP12.27□□□□□ -0.45
ACTN4-209ENST00000586538 CACNG4Q9UBN1 327 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 KCNH3Q9ULD8 1083 aa12.27□□□□□ -0.45
ACTN4-209ENST00000586538 POLIQ9UNA4 740 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms