RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 TNNI1P19237 187 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 RABGGTBP53611 331 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 TPM4P67936 248 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 ENPEPQ07075 957 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 SPAG1Q07617 926 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 BFSP1Q12934 665 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 TCERG1LQ5VWI1 586 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 FAM109BQ6ICB4 259 aaPredicted RBP14.76□□□□□ -0.05
VMP1-203ENST00000586245 WDR49Q8IV35 697 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 GSTCDQ8NEC7 633 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 BEST2Q8NFU1 509 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 PARD3BQ8TEW8 1205 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 ANKRD36BP1Q96IX9 119 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 CNOT6LQ96LI5 555 aaKnown RBP14.76□□□□□ -0.05
VMP1-203ENST00000586245 ZMAT2Q96NC0 199 aaKnown RBP14.76□□□□□ -0.05
VMP1-203ENST00000586245 PPP1R10Q96QC0 940 aaKnown RBP14.76□□□□□ -0.05
VMP1-203ENST00000586245 CGRRF1Q99675 332 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 CXCL16Q9H2A7 254 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 RC3H2Q9HBD1 1191 aaKnown RBP14.76□□□□□ -0.05
VMP1-203ENST00000586245 CBX8Q9HC52 389 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 TBC1D13Q9NVG8 400 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 MSRAQ9UJ68 235 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 UBQLN1Q9UMX0 589 aaKnown RBP14.76□□□□□ -0.05
VMP1-203ENST00000586245 C2CD2Q9Y426 696 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 PCDHA11Q9Y5I1 949 aa14.76□□□□□ -0.05
VMP1-203ENST00000586245 PTPRSQ13332 1948 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 STX10O60499 249 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 TNNC2P02585 160 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 NFICP08651 508 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 MTIF2P46199 727 aaKnown RBP14.75□□□□□ -0.05
VMP1-203ENST00000586245 TFAMQ00059 246 aaKnown RBP14.75□□□□□ -0.05
VMP1-203ENST00000586245 RAB30Q15771 203 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 DUOXA2Q1HG44 320 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 DCAF17Q5H9S7 520 aaPredicted RBP14.75□□□□□ -0.05
VMP1-203ENST00000586245 EFCAB13Q8IY85 973 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 FAM200AQ8TCP9 573 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 BORCS6Q96GS4 357 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 SAMSN1Q9NSI8 373 aaKnown RBP14.75□□□□□ -0.05
VMP1-203ENST00000586245 FANCLQ9NW38 375 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 PLAGL2Q9UPG8 496 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 COLQQ9Y215 455 aaPredicted RBP14.75□□□□□ -0.05
VMP1-203ENST00000586245 RALGAPA2Q2PPJ7 1873 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 CITO14578 2027 aa14.75□□□□□ -0.05
VMP1-203ENST00000586245 LRRIQ3A6PVS8 624 aaPredicted RBP14.74□□□□□ -0.05
VMP1-203ENST00000586245 GOLGA6L19H0YKK7 550 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 CYP3A5P20815 502 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 AP3M2P53677 418 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 MARSP56192 900 aaKnown RBP14.74□□□□□ -0.05
VMP1-203ENST00000586245 WNT7BP56706 349 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 TUSC3Q13454 348 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 IQCB1Q15051 598 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 HSP90AA4PQ58FG1 418 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 LMBRD2Q68DH5 695 aaPredicted RBP14.74□□□□□ -0.05
VMP1-203ENST00000586245 ZNF280BQ86YH2 543 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 DHX40Q8IX18 779 aaKnown RBP14.74□□□□□ -0.05
VMP1-203ENST00000586245 ANKRD20A12PQ8NF67 263 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 PLEKHO2Q8TD55 490 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 SP7Q8TDD2 431 aaPredicted RBP14.74□□□□□ -0.05
VMP1-203ENST00000586245 C18orf25Q96B23 403 aaPredicted RBP14.74□□□□□ -0.05
VMP1-203ENST00000586245 UROC1Q96N76 676 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 NRDE2Q9H7Z3 1164 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 INTS13Q9NVM9 706 aa14.74□□□□□ -0.05
VMP1-203ENST00000586245 R3HCC1Q9Y3T6 440 aaKnown RBP14.74□□□□□ -0.05
VMP1-203ENST00000586245 MRPL42Q9Y6G3 142 aaKnown RBP14.74□□□□□ -0.05
VMP1-203ENST00000586245 CARNS1A5YM72 827 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 KCNJ18B7U540 433 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 ZC3H11AO75152 810 aaKnown RBP eCLIP14.73□□□□□ -0.05
VMP1-203ENST00000586245 DDHD2O94830 711 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 TPM2P07951 284 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 TRIM49P0CI25 452 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 TRIM49CP0CI26 452 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 LAG3P18627 525 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 CDK11BP21127 795 aaKnown RBP14.73□□□□□ -0.05
VMP1-203ENST00000586245 EEF1GP26641 437 aaKnown RBP14.73□□□□□ -0.05
VMP1-203ENST00000586245 OR1G1P47890 313 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 DLG4P78352 724 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 SMAD3P84022 425 aaKnown RBP14.73□□□□□ -0.05
VMP1-203ENST00000586245 DSC1Q08554 894 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 KCNJ12Q14500 433 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 NCAPHQ15003 741 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 NAB2Q15742 525 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 ZBTB6Q15916 424 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 CDKAL1Q5VV42 579 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 LUZP1Q86V48 1076 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 IRF2BP1Q8IU81 584 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 TRIM59Q8IWR1 403 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 COLGALT2Q8IYK4 626 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 DDX27Q96GQ7 796 aaKnown RBP14.73□□□□□ -0.05
VMP1-203ENST00000586245 POP1Q99575 1024 aaKnown RBP14.73□□□□□ -0.05
VMP1-203ENST00000586245 TMEM175Q9BSA9 504 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 MTMR12Q9C0I1 747 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 CWH43Q9H720 699 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 AAASQ9NRG9 546 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 DPP3Q9NY33 737 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 TUBGCP4Q9UGJ1 667 aa14.73□□□□□ -0.05
VMP1-203ENST00000586245 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.73□□□□□ -0.05
VMP1-203ENST00000586245 FNDC1Q4ZHG4 1894 aaPredicted RBP14.73□□□□□ -0.05
VMP1-203ENST00000586245 PTPRJQ12913 1337 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 COL4A6Q14031 1691 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 LCHNA4D1U4 455 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms