RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 ANKZF1Q9H8Y5 726 aa15.25■□□□□ 0.03
LIG3-205ENST00000585941 IFT122Q9HBG6 1241 aa15.25■□□□□ 0.03
LIG3-205ENST00000585941 AKT3Q9Y243 479 aa15.25■□□□□ 0.03
LIG3-205ENST00000585941 PTPRJQ12913 1337 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 TMCO5BA8MYB1 307 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 NCK2O43639 380 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 B4GALT4O60513 344 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 MCF2P10911 925 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 RGS2P41220 211 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 WNT7BP56706 349 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 CUL2Q13617 745 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 LMBRD2Q68DH5 695 aaPredicted RBP15.24■□□□□ 0.03
LIG3-205ENST00000585941 PPP1R2P3Q6NXS1 205 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 PEX26Q7Z412 305 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 NOA1Q8NC60 698 aaKnown RBP15.24■□□□□ 0.03
LIG3-205ENST00000585941 HNRNPLLQ8WVV9 542 aaKnown RBP15.24■□□□□ 0.03
LIG3-205ENST00000585941 USP6NLQ92738 828 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 PI4K2AQ9BTU6 479 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 SELENOOQ9BVL4 669 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 CCDC94Q9BW85 323 aaPredicted RBP15.24■□□□□ 0.03
LIG3-205ENST00000585941 ARFGAP3Q9NP61 516 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 Q9Y3F1 56 aa15.24■□□□□ 0.03
LIG3-205ENST00000585941 KIF4AO95239 1232 aa15.23■□□□□ 0.03
LIG3-205ENST00000585941 CLTAP09496 248 aa15.23■□□□□ 0.03
LIG3-205ENST00000585941 NOP14P78316 857 aaKnown RBP15.23■□□□□ 0.03
LIG3-205ENST00000585941 FMO1Q01740 532 aa15.23■□□□□ 0.03
LIG3-205ENST00000585941 WDR93Q6P2C0 686 aa15.23■□□□□ 0.03
LIG3-205ENST00000585941 APBB1IPQ7Z5R6 666 aaPredicted RBP15.23■□□□□ 0.03
LIG3-205ENST00000585941 DAAM2Q86T65 1068 aa15.23■□□□□ 0.03
LIG3-205ENST00000585941 OR5B17Q8NGF7 314 aa15.23■□□□□ 0.03
LIG3-205ENST00000585941 THAP2Q9H0W7 228 aa15.23■□□□□ 0.03
LIG3-205ENST00000585941 RPF1Q9H9Y2 349 aaKnown RBP15.23■□□□□ 0.03
LIG3-205ENST00000585941 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.23■□□□□ 0.031e-6■■■■■ 36.9
LIG3-205ENST00000585941 CNTN6Q9UQ52 1028 aa15.23■□□□□ 0.03
LIG3-205ENST00000585941 GNEQ9Y223 722 aaKnown RBP15.23■□□□□ 0.03
LIG3-205ENST00000585941 ANK1P16157 1881 aa15.23■□□□□ 0.03
LIG3-205ENST00000585941 A0A087WZ62 844 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 PDE2AO00408 941 aaPredicted RBP15.22■□□□□ 0.03
LIG3-205ENST00000585941 DYNC1LI2O43237 492 aaPredicted RBP15.22■□□□□ 0.03
LIG3-205ENST00000585941 MTA2O94776 668 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 ASS1P00966 412 aaKnown RBP15.22■□□□□ 0.03
LIG3-205ENST00000585941 TNNC2P02585 160 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 GJB1P08034 283 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 RHOXF2BP0C7M4 288 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 ABCB4P21439 1286 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 TNFSF9P41273 254 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 SGSM1Q2NKQ1 1148 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 TRIM72Q6ZMU5 477 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 PALB2Q86YC2 1186 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 SPATA4Q8NEY3 305 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 DDX1Q92499 740 aaKnown RBP15.22■□□□□ 0.03
LIG3-205ENST00000585941 TRIM11Q96F44 468 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 FAXDC2Q96IV6 333 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 ANKRD36BP1Q96IX9 119 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 APBA2Q99767 749 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 RHOXF2Q9BQY4 288 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 FDXACB1Q9BRP7 624 aaPredicted RBP15.22■□□□□ 0.03
LIG3-205ENST00000585941 CDT1Q9H211 546 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 MINDY3Q9H8M7 445 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 TAS2R14Q9NYV8 317 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 AMFRQ9UKV5 643 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 NRCAMQ92823 1304 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 B4GALT5O43286 388 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 F2P00734 622 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 MMEP08473 750 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 TMEM191BP0C7N4 346 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 ZNF865P0CJ78 1059 aaPredicted RBP15.22■□□□□ 0.03
LIG3-205ENST00000585941 CXCR5P32302 372 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 CPT1AP50416 773 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 PCBP1Q15365 356 aaKnown RBP eCLIP15.22■□□□□ 0.03
LIG3-205ENST00000585941 CLUL1Q15846 466 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 AMHR2Q16671 573 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 SEZ6Q53EL9 994 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 GLE1Q53GS7 698 aaKnown RBP15.22■□□□□ 0.03
LIG3-205ENST00000585941 TAF3Q5VWG9 929 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 ACAD10Q6JQN1 1059 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 C11orf63Q6NUN7 778 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 CC2D1AQ6P1N0 951 aaPredicted RBP15.22■□□□□ 0.03
LIG3-205ENST00000585941 THNSL1Q8IYQ7 743 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 NLRP7Q8WX94 980 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 PCDHB18PQ96TA0 734 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 ABCB6Q9NP58 842 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 GTF3C4Q9UKN8 822 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 STXBP5LQ9Y2K9 1186 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 TLL2Q9Y6L7 1015 aa15.22■□□□□ 0.03
LIG3-205ENST00000585941 PASKQ96RG2 1323 aa15.21■□□□□ 0.03
LIG3-205ENST00000585941 BUB1BO60566 1050 aaPredicted RBP15.21■□□□□ 0.03
LIG3-205ENST00000585941 MYBL1P10243 752 aa15.21■□□□□ 0.03
LIG3-205ENST00000585941 YWHAEP62258 255 aaKnown RBP15.21■□□□□ 0.03
LIG3-205ENST00000585941 TRPC3Q13507 836 aa15.21■□□□□ 0.03
LIG3-205ENST00000585941 CLEC16AQ2KHT3 1053 aa15.21■□□□□ 0.03
LIG3-205ENST00000585941 MARCH8Q5T0T0 291 aa15.21■□□□□ 0.03
LIG3-205ENST00000585941 TLK2Q86UE8 772 aa15.21■□□□□ 0.03
LIG3-205ENST00000585941 NT5DC3Q86UY8 548 aa15.21■□□□□ 0.03
LIG3-205ENST00000585941 FAM212AQ96EL1 285 aa15.21■□□□□ 0.03
LIG3-205ENST00000585941 HES6Q96HZ4 224 aa15.21■□□□□ 0.03
LIG3-205ENST00000585941 SCLT1Q96NL6 688 aa15.21■□□□□ 0.03
LIG3-205ENST00000585941 PSMB7Q99436 277 aa15.21■□□□□ 0.03
LIG3-205ENST00000585941 AP5M1Q9H0R1 490 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms