RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 MXD4Q14582 209 aaPredicted RBP20.06■□□□□ 0.8
TOP3A-220ENST00000585031 ELSPBP1Q96BH3 223 aa20.06■□□□□ 0.8
TOP3A-220ENST00000585031 C22orf23Q9BZE7 217 aa20.06■□□□□ 0.8
TOP3A-220ENST00000585031 LMAN1LQ9HAT1 526 aa20.06■□□□□ 0.8
TOP3A-220ENST00000585031 GREB1Q4ZG55 1949 aa20.06■□□□□ 0.8
TOP3A-220ENST00000585031 NCANO14594 1321 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 SLITRK3O94933 977 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 LIMK1P53667 647 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 PPP2R5DQ14738 602 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 WDR44Q5JSH3 913 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 FBXL16Q8N461 479 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 DAGLBQ8NCG7 672 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 FAM20AQ96MK3 541 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 JAKMIP1Q96N16 626 aaKnown RBP20.05■□□□□ 0.8
TOP3A-220ENST00000585031 C2orf42Q9NWW7 574 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 SNTG2Q9NY99 539 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 GDE1Q9NZC3 331 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 MTRRQ9UBK8 725 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 USP20Q9Y2K6 914 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 PKD1L2Q7Z442 2459 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 ZMYM2Q9UBW7 1377 aa20.05■□□□□ 0.8
TOP3A-220ENST00000585031 CHURC1-FNTBB4DL54 471 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 MAN2B1O00754 1011 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 DKC1O60832 514 aaKnown RBP eCLIP20.04■□□□□ 0.8
TOP3A-220ENST00000585031 FGFR3P22607 806 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 CCR2P41597 374 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 FNTBP49356 437 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 NCBP1Q09161 790 aaKnown RBP20.04■□□□□ 0.8
TOP3A-220ENST00000585031 SIM2Q14190 667 aaPredicted RBP20.04■□□□□ 0.8
TOP3A-220ENST00000585031 ACAP1Q15027 740 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 FAM78AQ5JUQ0 283 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 PRSS36Q5K4E3 855 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 NCAPH2Q6IBW4 605 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 OTUD6AQ7L8S5 288 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 MAP4K3Q8IVH8 894 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 HACE1Q8IYU2 909 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 DNASE1L2Q92874 299 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 ZSWIM3Q96MP5 696 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 NFKBIZQ9BYH8 718 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 KCNJ14Q9UNX9 436 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 SNX14Q9Y5W7 946 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 CDY1Q9Y6F8 540 aa20.04■□□□□ 0.8
TOP3A-220ENST00000585031 SPAG17Q6Q759 2223 aa20.03■□□□□ 0.8
TOP3A-220ENST00000585031 CHRNB1P11230 501 aa20.03■□□□□ 0.8
TOP3A-220ENST00000585031 CCR3P51677 355 aa20.03■□□□□ 0.8
TOP3A-220ENST00000585031 EVCP57679 992 aa20.03■□□□□ 0.8
TOP3A-220ENST00000585031 TFDP1Q14186 410 aa20.03■□□□□ 0.8
TOP3A-220ENST00000585031 RTL10Q7L3V2 364 aa20.03■□□□□ 0.8
TOP3A-220ENST00000585031 TPH2Q8IWU9 490 aa20.03■□□□□ 0.8
TOP3A-220ENST00000585031 ZSWIM4Q9H7M6 989 aa20.03■□□□□ 0.8
TOP3A-220ENST00000585031 ZNF334Q9HCZ1 680 aaPredicted RBP20.03■□□□□ 0.8
TOP3A-220ENST00000585031 AVENQ9NQS1 362 aaPredicted RBP20.03■□□□□ 0.8
TOP3A-220ENST00000585031 RXFP3Q9NSD7 469 aa20.03■□□□□ 0.8
TOP3A-220ENST00000585031 I3L4J1 428 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 DTNBO60941 627 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 EDN1P05305 212 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 THP07101 528 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 KCNA4P22459 653 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 RPS6KB1P23443 525 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 TKTP29401 623 aaKnown RBP20.02■□□□□ 0.8
TOP3A-220ENST00000585031 CNR2P34972 360 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 IL31Q6EBC2 164 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 VITQ6UXI7 678 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.02■□□□□ 0.8
TOP3A-220ENST00000585031 POTEDQ86YR6 584 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 BRD9Q9H8M2 597 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 GPRC5CQ9NQ84 441 aa20.02■□□□□ 0.8
TOP3A-220ENST00000585031 K7ESF4 209 aa20.01■□□□□ 0.79
TOP3A-220ENST00000585031 RECQL4O94761 1208 aa20.01■□□□□ 0.79
TOP3A-220ENST00000585031 CXCL12P48061 93 aa20.01■□□□□ 0.79
TOP3A-220ENST00000585031 SSRP1Q08945 709 aaKnown RBP20.01■□□□□ 0.79
TOP3A-220ENST00000585031 EARS2Q5JPH6 523 aaKnown RBP20.01■□□□□ 0.79
TOP3A-220ENST00000585031 PPP4R3AQ6IN85 833 aa20.01■□□□□ 0.79
TOP3A-220ENST00000585031 BLOC1S2Q6QNY1 142 aa20.01■□□□□ 0.79
TOP3A-220ENST00000585031 C3orf58Q8NDZ4 430 aa20.01■□□□□ 0.79
TOP3A-220ENST00000585031 FAM3CQ92520 227 aa20.01■□□□□ 0.79
TOP3A-220ENST00000585031 DDX27Q96GQ7 796 aaKnown RBP20.01■□□□□ 0.79
TOP3A-220ENST00000585031 ASB16Q96NS5 453 aa20.01■□□□□ 0.79
TOP3A-220ENST00000585031 TRMT61BQ9BVS5 477 aaKnown RBP20.01■□□□□ 0.79
TOP3A-220ENST00000585031 PDZD7Q9H5P4 517 aa20.01■□□□□ 0.79
TOP3A-220ENST00000585031 TRPV5Q9NQA5 729 aa20.01■□□□□ 0.79
TOP3A-220ENST00000585031 RBM12Q9NTZ6 932 aaKnown RBP20.01■□□□□ 0.79
TOP3A-220ENST00000585031 AKAP13Q12802 2813 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 ARHGEF37A1IGU5 675 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 MOSPD3O75425 235 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 PTPN2P17706 415 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 GDI1P31150 447 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 VIPR2P41587 438 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 BRCC3P46736 316 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 KRT25Q7Z3Z0 450 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 NOSTRINQ8IVI9 506 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 OXER1Q8TDS5 423 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 HSD17B14Q9BPX1 270 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 EIF2AK1Q9BQI3 630 aaKnown RBP20■□□□□ 0.79
TOP3A-220ENST00000585031 CORO1BQ9BR76 489 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 LARP6Q9BRS8 491 aaKnown RBP20■□□□□ 0.79
TOP3A-220ENST00000585031 POLR3FQ9H1D9 316 aaPredicted RBP20■□□□□ 0.79
TOP3A-220ENST00000585031 FZD8Q9H461 694 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 GJB4Q9NTQ9 266 aa20■□□□□ 0.79
TOP3A-220ENST00000585031 PIAS3Q9Y6X2 628 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms