RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 SPATA31D3P0C874 917 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 MCF2P10911 925 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 SCP2P22307 547 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 TUSC3Q13454 348 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 HSP90AA2PQ14568 343 aaPredicted RBP19.53■□□□□ 0.72
ERBB2-221ENST00000584888 AXDND1Q5T1B0 1012 aaPredicted RBP19.53■□□□□ 0.72
ERBB2-221ENST00000584888 ATL3Q6DD88 541 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 ELMSAN1Q6PJG2 1045 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 MPZL3Q6UWV2 235 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 SPATA31D4Q6ZUB0 917 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 APBB1IPQ7Z5R6 666 aaPredicted RBP19.53■□□□□ 0.72
ERBB2-221ENST00000584888 PALB2Q86YC2 1186 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 GPR65Q8IYL9 337 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 MYCT1Q8N699 235 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 CEP120Q8N960 986 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 RIN2Q8WYP3 895 aaPredicted RBP19.53■□□□□ 0.72
ERBB2-221ENST00000584888 DNAJC19Q96DA6 116 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.53■□□□□ 0.72
ERBB2-221ENST00000584888 GDAQ9Y2T3 454 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 ZDHHC9Q9Y397 364 aa19.53■□□□□ 0.72
ERBB2-221ENST00000584888 MYMKA6NI61 221 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 MEFVO15553 781 aaPredicted RBP19.52■□□□□ 0.72
ERBB2-221ENST00000584888 RFPL2O75678 378 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 FAM13AO94988 1023 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 PIGRP01833 764 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 THP07101 528 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 TXLNAP40222 546 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 PTPN5P54829 565 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 TCF15Q12870 199 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 STRN3Q13033 797 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 ZNF568Q3ZCX4 644 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 CYP26C1Q6V0L0 522 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 CCDC73Q6ZRK6 1079 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 PPP1R10Q96QC0 940 aaKnown RBP19.52■□□□□ 0.72
ERBB2-221ENST00000584888 HAPLN2Q9GZV7 340 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 ST6GALNAC4Q9H4F1 302 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 FNIP2Q9P278 1114 aa19.52■□□□□ 0.72
ERBB2-221ENST00000584888 PDCD11Q14690 1871 aaKnown RBP19.52■□□□□ 0.71
ERBB2-221ENST00000584888 CASTOR2A6NHX0 329 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 TGM5O43548 720 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 TRAK2O60296 914 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 CUTAO60888 179 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 C1RP00736 705 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 RPL17P18621 184 aaKnown RBP19.51■□□□□ 0.71
ERBB2-221ENST00000584888 GTF2BQ00403 316 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 MCL1Q07820 350 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 LILRA6Q6PI73 481 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 SV2BQ7L1I2 683 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 HDAC7Q8WUI4 952 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 DDX12PQ92771 950 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 RHOBTB2Q9BYZ6 727 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 PANK2Q9BZ23 570 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 PLEKHA4Q9H4M7 779 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 TBX20Q9UMR3 447 aa19.51■□□□□ 0.71
ERBB2-221ENST00000584888 SF3B1O75533 1304 aaKnown RBP eCLIP19.51■□□□□ 0.71
ERBB2-221ENST00000584888 WDFY4Q6ZS81 3184 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 KRT18P05783 430 aaKnown RBP19.5■□□□□ 0.71
ERBB2-221ENST00000584888 CREMQ03060 361 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 E2F4Q16254 413 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 RTP2Q5QGT7 225 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 SHC4Q6S5L8 630 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 PRSS55Q6UWB4 352 aaPredicted RBP19.5■□□□□ 0.71
ERBB2-221ENST00000584888 GLYCTKQ8IVS8 523 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 HASPINQ8TF76 798 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 PHOX2BQ99453 314 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 CCDC94Q9BW85 323 aaPredicted RBP19.5■□□□□ 0.71
ERBB2-221ENST00000584888 STRA6Q9BX79 667 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 WDR6Q9NNW5 1121 aaKnown RBP19.5■□□□□ 0.71
ERBB2-221ENST00000584888 RCOR1Q9UKL0 485 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 TCHHQ07283 1943 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 PLXNA3P51805 1871 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 DENND4AQ7Z401 1863 aa19.5■□□□□ 0.71
ERBB2-221ENST00000584888 SMIM28A0A1B0GU29 152 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 KIF4AO95239 1232 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 PAPLNO95428 1278 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 KCNE1P15382 129 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 NMT1P30419 496 aaKnown RBP19.49■□□□□ 0.71
ERBB2-221ENST00000584888 NOLC1Q14978 699 aaKnown RBP eCLIP19.49■□□□□ 0.719e-7■■□□□ 13.7
ERBB2-221ENST00000584888 FOXD4L6Q3SYB3 417 aaPredicted RBP19.49■□□□□ 0.71
ERBB2-221ENST00000584888 FAM171A1Q5VUB5 890 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 FOXD4L3Q6VB84 417 aaPredicted RBP19.49■□□□□ 0.71
ERBB2-221ENST00000584888 DYMQ7RTS9 669 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 SMG7Q92540 1137 aaKnown RBP19.49■□□□□ 0.71
ERBB2-221ENST00000584888 ZNF707Q96C28 371 aaPredicted RBP19.49■□□□□ 0.71
ERBB2-221ENST00000584888 SNX27Q96L92 541 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 ACAP3Q96P50 834 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 TCHPQ9BT92 498 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 TTPALQ9BTX7 342 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 KCNK12Q9HB15 430 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 C2orf16Q68DN1 1984 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 KMT2EQ8IZD2 1858 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 VWA8A3KMH1 1905 aa19.49■□□□□ 0.71
ERBB2-221ENST00000584888 FRMD3A2A2Y4 597 aa19.48■□□□□ 0.71
ERBB2-221ENST00000584888 K7ENM7 598 aa19.48■□□□□ 0.71
ERBB2-221ENST00000584888 CLDN3O15551 220 aa19.48■□□□□ 0.71
ERBB2-221ENST00000584888 FAM189A1O60320 539 aa19.48■□□□□ 0.71
ERBB2-221ENST00000584888 N4BP1O75113 896 aaKnown RBP19.48■□□□□ 0.71
ERBB2-221ENST00000584888 TBCAO75347 108 aaKnown RBP19.48■□□□□ 0.71
ERBB2-221ENST00000584888 PPP1R37O75864 691 aa19.48■□□□□ 0.71
ERBB2-221ENST00000584888 ABCD1P33897 745 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms