RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 TMEM189-UBE2V1I3L0A0 370 aa22.39■■□□□ 1.17
TOP3A-219ENST00000584887 FGFR3P22607 806 aa22.39■■□□□ 1.17
TOP3A-219ENST00000584887 TKTP29401 623 aaKnown RBP22.39■■□□□ 1.17
TOP3A-219ENST00000584887 BRCC3P46736 316 aa22.39■■□□□ 1.17
TOP3A-219ENST00000584887 NTHL1P78549 312 aa22.39■■□□□ 1.17
TOP3A-219ENST00000584887 SOX4Q06945 474 aaPredicted RBP22.39■■□□□ 1.17
TOP3A-219ENST00000584887 STRN3Q13033 797 aa22.39■■□□□ 1.17
TOP3A-219ENST00000584887 CWF19L1Q69YN2 538 aaKnown RBP22.39■■□□□ 1.17
TOP3A-219ENST00000584887 MPZL3Q6UWV2 235 aa22.39■■□□□ 1.17
TOP3A-219ENST00000584887 SLC7A14Q8TBB6 771 aa22.39■■□□□ 1.17
TOP3A-219ENST00000584887 ACAP3Q96P50 834 aa22.39■■□□□ 1.17
TOP3A-219ENST00000584887 PNMA5Q96PV4 448 aa22.39■■□□□ 1.17
TOP3A-219ENST00000584887 TIPINQ9BVW5 301 aa22.39■■□□□ 1.17
TOP3A-219ENST00000584887 PTPRHQ9HD43 1115 aa22.39■■□□□ 1.17
TOP3A-219ENST00000584887 TRAPPC3O43617 180 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 XYLBO75191 536 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 HNRNPA1P09651 372 aaKnown RBP eCLIP22.38■■□□□ 1.17
TOP3A-219ENST00000584887 MCF2P10911 925 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 LAMP2P13473 410 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 GUCY2CP25092 1073 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 CLCN5P51795 746 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 UPP1Q16831 310 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 SLC44A3Q8N4M1 653 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 C3orf58Q8NDZ4 430 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 SNX27Q96L92 541 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 C17orf75Q9HAS0 396 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 SLC38A7Q9NVC3 462 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 MTRRQ9UBK8 725 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 DAXXQ9UER7 740 aaPredicted RBP22.38■■□□□ 1.17
TOP3A-219ENST00000584887 CA14Q9ULX7 337 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 CDY1Q9Y6F8 540 aa22.38■■□□□ 1.17
TOP3A-219ENST00000584887 PODXLO00592 558 aa22.37■■□□□ 1.17
TOP3A-219ENST00000584887 PAPLNO95428 1278 aa22.37■■□□□ 1.17
TOP3A-219ENST00000584887 PLA2G4BP0C869 781 aa22.37■■□□□ 1.17
TOP3A-219ENST00000584887 PLS3P13797 630 aa22.37■■□□□ 1.17
TOP3A-219ENST00000584887 MATR3P43243 847 aaKnown RBP eCLIP22.37■■□□□ 1.17
TOP3A-219ENST00000584887 SMTNP53814 917 aa22.37■■□□□ 1.17
TOP3A-219ENST00000584887 CACNB1Q02641 598 aaPredicted RBP22.37■■□□□ 1.17
TOP3A-219ENST00000584887 RAB33AQ14088 237 aa22.37■■□□□ 1.17
TOP3A-219ENST00000584887 AXDND1Q5T1B0 1012 aaPredicted RBP22.37■■□□□ 1.17
TOP3A-219ENST00000584887 DDX27Q96GQ7 796 aaKnown RBP22.37■■□□□ 1.17
TOP3A-219ENST00000584887 ZBTB45Q96K62 511 aaPredicted RBP22.37■■□□□ 1.17
TOP3A-219ENST00000584887 NPHP3-ACAD11A0A0J9YXS1 232 aa22.36■■□□□ 1.17
TOP3A-219ENST00000584887 NOLC1Q14978 699 aaKnown RBP eCLIP22.36■■□□□ 1.17
TOP3A-219ENST00000584887 SEZ6Q53EL9 994 aa22.36■■□□□ 1.17
TOP3A-219ENST00000584887 HYIQ5T013 277 aa22.36■■□□□ 1.17
TOP3A-219ENST00000584887 CD300LGQ6UXG3 332 aa22.36■■□□□ 1.17
TOP3A-219ENST00000584887 ANKS3Q6ZW76 656 aa22.36■■□□□ 1.17
TOP3A-219ENST00000584887 SYT2Q8N9I0 419 aaPredicted RBP22.36■■□□□ 1.17
TOP3A-219ENST00000584887 NXPE3Q969Y0 559 aa22.36■■□□□ 1.17
TOP3A-219ENST00000584887 C18orf25Q96B23 403 aaPredicted RBP22.36■■□□□ 1.17
TOP3A-219ENST00000584887 BICD1Q96G01 975 aa22.36■■□□□ 1.17
TOP3A-219ENST00000584887 ZMAT2Q96NC0 199 aaKnown RBP22.36■■□□□ 1.17
TOP3A-219ENST00000584887 NUB1Q9Y5A7 615 aa22.36■■□□□ 1.17
TOP3A-219ENST00000584887 NUMBLQ9Y6R0 609 aa22.36■■□□□ 1.17
TOP3A-219ENST00000584887 MYH11P35749 1972 aa22.36■■□□□ 1.17
TOP3A-219ENST00000584887 ABLIM1O14639 778 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 PI15O43692 258 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 GFRA3O60609 400 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 SRFP11831 508 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 NPR3P17342 541 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 AOC1P19801 751 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 PROZP22891 400 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 ARPP19P56211 112 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 HTR4Q13639 388 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 ARL6IP4Q66PJ3 421 aaKnown RBP22.35■■□□□ 1.17
TOP3A-219ENST00000584887 ALKAL1Q6UXT8 129 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 RSPO2Q6UXX9 243 aaPredicted RBP22.35■■□□□ 1.17
TOP3A-219ENST00000584887 TMEM161BQ8NDZ6 487 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 SPIRE2Q8WWL2 714 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 WNT16Q9UBV4 365 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 CDH7Q9ULB5 785 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 ZFHX2Q9C0A1 2572 aaPredicted RBP22.35■■□□□ 1.17
TOP3A-219ENST00000584887 CITO14578 2027 aa22.35■■□□□ 1.17
TOP3A-219ENST00000584887 TOM1L1O75674 476 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 MAPTP10636 758 aaKnown RBP22.34■■□□□ 1.17
TOP3A-219ENST00000584887 KCNE1P15382 129 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 HOXA9P31269 272 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 MCM2P49736 904 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 SLC12A3P55017 1021 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 DHX8Q14562 1220 aaKnown RBP22.34■■□□□ 1.17
TOP3A-219ENST00000584887 TMEM119Q4V9L6 283 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 XKR4Q5GH76 650 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 LARP1BQ659C4 914 aaKnown RBP22.34■■□□□ 1.17
TOP3A-219ENST00000584887 RASSF8Q8NHQ8 419 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 RTP3Q9BQQ7 232 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 HCFC1R1Q9NWW0 138 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 KCNG1Q9UIX4 513 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 BACE2Q9Y5Z0 518 aa22.34■■□□□ 1.17
TOP3A-219ENST00000584887 KRBA1A5PL33 1030 aa22.33■■□□□ 1.17
TOP3A-219ENST00000584887 ANHXE9PGG2 379 aa22.33■■□□□ 1.17
TOP3A-219ENST00000584887 VARS2Q5ST30 1063 aaKnown RBP22.33■■□□□ 1.17
TOP3A-219ENST00000584887 GPBP1Q86WP2 473 aa22.33■■□□□ 1.17
TOP3A-219ENST00000584887 ITFG1Q8TB96 612 aa22.33■■□□□ 1.17
TOP3A-219ENST00000584887 GPR152Q8TDT2 470 aa22.33■■□□□ 1.17
TOP3A-219ENST00000584887 NTPCRQ9BSD7 190 aaKnown RBP22.33■■□□□ 1.17
TOP3A-219ENST00000584887 TBC1D17Q9HA65 648 aa22.33■■□□□ 1.17
TOP3A-219ENST00000584887 CNTN3Q9P232 1028 aa22.33■■□□□ 1.17
TOP3A-219ENST00000584887 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.33■■□□□ 1.17
TOP3A-219ENST00000584887 ZFP37Q9Y6Q3 630 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms