RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	CUL7	Q14999	1698 aa		4.09	□□□□□ -1.76
VAPA-208	ENST00000584796	COL11A2	P13942	1736 aa	Predicted RBP	4.09	□□□□□ -1.76
VAPA-208	ENST00000584796	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	MAPKBP1	O60336	1514 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	KIF21B	O75037	1637 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	PLA2G5	P39877	138 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	PTH2R	P49190	550 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	ELL	P55199	621 aa	Predicted RBP	4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	SESN3	P58005	492 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	OCA2	Q04671	838 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	NUP160	Q12769	1436 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	SP140	Q13342	867 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	RRP12	Q5JTH9	1297 aa	Known RBP	4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	GJC2	Q5T442	439 aa	Predicted RBP	4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	GPR149	Q86SP6	731 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	JAZF1	Q86VZ6	243 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	DRC7	Q8IY82	874 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	SLC44A3	Q8N4M1	653 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	BOLL	Q8N9W6	283 aa	Known RBP	4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	CLRN3	Q8NCR9	226 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	GPR156	Q8NFN8	814 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	TSPEAR	Q8WU66	669 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	LEO1	Q8WVC0	666 aa	Predicted RBP	4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	RIN2	Q8WYP3	895 aa	Predicted RBP	4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	TMEM74B	Q9NUR3	256 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	FAM30A	Q9NZY2	134 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	DPP7	Q9UHL4	492 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	SCOC	Q9UIL1	159 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	MAPRE3	Q9UPY8	281 aa		4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	MRPL42	Q9Y6G3	142 aa	Known RBP	4.08	□□□□□ -1.76
VAPA-208	ENST00000584796	SALL3	Q9BXA9	1300 aa		4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	PDE8A	O60658	829 aa		4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	PTPN7	P35236	360 aa		4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	ATXN1	P54253	815 aa	Known RBP	4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	KRTAP10-11	P60412	298 aa		4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	ZNF169	Q14929	603 aa	Predicted RBP	4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	ADRM1	Q16186	407 aa		4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	MED25	Q71SY5	747 aa		4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	CAGE1	Q8TC20	777 aa		4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	HOXB13	Q92826	284 aa	Predicted RBP	4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	BOD1	Q96IK1	185 aa		4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	ALOXE3	Q9BYJ1	711 aa		4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	TLK1	Q9UKI8	766 aa		4.07	□□□□□ -1.76
VAPA-208	ENST00000584796	EDAR	Q9UNE0	448 aa		4.07	□□□□□ -1.76
VAPA-208	ENST00000584796		A0A1B0GTW7	788 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	NEMP1	O14524	444 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	AKR1B10	O60218	316 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	ZEB2	O60315	1214 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	ULK1	O75385	1050 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	C1R	P00736	705 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	GCSH	P23434	173 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	ECHS1	P30084	290 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	ADSL	P30566	484 aa	Predicted RBP	4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	GUCY1A2	P33402	732 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	SREBF1	P36956	1147 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	SIM1	P81133	766 aa	Predicted RBP	4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	MRPS9	P82933	396 aa	Known RBP	4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	NHLH1	Q02575	133 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	SPDYE7P	Q495Y7	208 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	TSHZ3	Q63HK5	1081 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	AFMID	Q63HM1	303 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796		Q6ZNX1	250 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	USP7	Q93009	1102 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	PHACTR3	Q96KR7	559 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796		Q96MF0	132 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	ORAI2	Q96SN7	254 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	ZSWIM1	Q9BR11	485 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	RNPEP	Q9H4A4	650 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	WDR26	Q9H7D7	661 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	IFT22	Q9H7X7	185 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	RSAD1	Q9HA92	442 aa		4.06	□□□□□ -1.76
VAPA-208	ENST00000584796	CDK4	P11802	303 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	MYCLP1	P12525	358 aa	Predicted RBP	4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	IL2RB	P14784	551 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	FGFR4	P22455	802 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	ID4	P47928	161 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	RAP2B	P61225	183 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	CXADR	P78310	365 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	CDK17	Q00537	523 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	MUM1	Q2TAK8	710 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	RNF180	Q86T96	592 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	FAM43A	Q8N2R8	423 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	FBXO18	Q8NFZ0	1043 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	AUTS2	Q8WXX7	1259 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	MRI1	Q9BV20	369 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	DUSP26	Q9BV47	211 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	REXO4	Q9GZR2	422 aa	Known RBP	4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	GALNT9	Q9HCQ5	603 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	FOXJ2	Q9P0K8	574 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	TES	Q9UGI8	421 aa	Known RBP	4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	KCNE5	Q9UJ90	142 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	SIK3	Q9Y2K2	1263 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	FRMD4B	Q9Y2L6	1034 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	NOX1	Q9Y5S8	564 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	MAP3K4	Q9Y6R4	1608 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	ABCA10	Q8WWZ4	1543 aa		4.05	□□□□□ -1.76
VAPA-208	ENST00000584796	ABCC2	Q92887	1545 aa		4.05	□□□□□ -1.76

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