RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 OR5B17Q8NGF7 314 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 GPRASP2Q96D09 838 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 EFCC1Q9HA90 598 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 ATRNL1Q5VV63 1379 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 SPDYE16A6NNV3 312 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-217ENST00000584582 RALAP11233 206 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 RGS7P49802 495 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 PMS2P54278 862 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 BPIFB4P59827 614 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 MYL6P60660 151 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 TGFB2P61812 414 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 ATP11AP98196 1134 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 AMHR2Q16671 573 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 ATP8B4Q8TF62 1192 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 ATP6V1G3Q96LB4 118 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 MMP19Q99542 508 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 NGRNQ9NPE2 291 aaKnown RBP12.05□□□□□ -0.48
TOP3A-217ENST00000584582 SYNGAP1Q96PV0 1343 aa12.05□□□□□ -0.48
TOP3A-217ENST00000584582 ZMYM2Q9UBW7 1377 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 PHF20L1A8MW92 1017 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 VTNP04004 478 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 HOXA7P31268 230 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-217ENST00000584582 IFRD2Q12894 506 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-217ENST00000584582 NEDD9Q14511 834 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 PPP2R5DQ14738 602 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 GLRA4Q5JXX5 417 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 FKBP1CQ5VVH2 108 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 PPP1R21Q6ZMI0 780 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 MICALCLQ6ZW33 695 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 CCDC89Q8N998 374 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 RPF1Q9H9Y2 349 aaKnown RBP12.04□□□□□ -0.48
TOP3A-217ENST00000584582 INTS9Q9NV88 658 aaKnown RBP12.04□□□□□ -0.48
TOP3A-217ENST00000584582 WDR91A4D1P6 747 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 H0YCG3 227 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 RASGRF2O14827 1237 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 PPFIA4O75335 1185 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 KCNA3P22001 575 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 RPS12P25398 132 aaKnown RBP12.04□□□□□ -0.48
TOP3A-217ENST00000584582 MARSP56192 900 aaKnown RBP12.04□□□□□ -0.48
TOP3A-217ENST00000584582 KYNUQ16719 465 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 TTMPQ5BVD1 217 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 OR6B2Q6IFH4 312 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 EFCAB12Q6NXP0 572 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 EMC1Q8N766 993 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 ANKRD36BP1Q96IX9 119 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 CCDC77Q9BR77 488 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 NEUROG2Q9H2A3 272 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 SEMA4AQ9H3S1 761 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 MIF4GDA9UHW6 222 aaKnown RBP12.04□□□□□ -0.48
TOP3A-217ENST00000584582 TBC1D12O60347 775 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 SP2Q02086 613 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 BMT2Q1RMZ1 405 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 HSDL1Q3SXM5 330 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 PPP6R3Q5H9R7 873 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-217ENST00000584582 CEP57Q86XR8 500 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 UBA3Q8TBC4 463 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 CRYGNQ8WXF5 182 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 ZSWIM1Q9BR11 485 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 ERP44Q9BS26 406 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 MIS12Q9H081 205 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 SPATC1LQ9H0A9 340 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 ISCUQ9H1K1 167 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 ADGRA3Q8IWK6 1321 aa12.04□□□□□ -0.48
TOP3A-217ENST00000584582 UBA1P22314 1058 aaKnown RBP12.03□□□□□ -0.48
TOP3A-217ENST00000584582 PSMA2P25787 234 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 PRKCIP41743 596 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 CDR2Q01850 454 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 UMODL1Q5DID0 1318 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 SLFN12LQ6IEE8 588 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 CTAGE3PQ8IX95 158 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 FAM149B1Q96BN6 582 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 CPB2Q96IY4 423 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 VIPAS39Q9H9C1 493 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 IKBKGQ9Y6K9 419 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 FAM169AQ9Y6X4 670 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 NAV1Q8NEY1 1877 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 GTPBP10A4D1E9 387 aaKnown RBP12.03□□□□□ -0.48
TOP3A-217ENST00000584582 FOXO6A8MYZ6 492 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 MYCP01106 439 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-217ENST00000584582 MMP14P50281 582 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 BASP1P80723 227 aaKnown RBP12.03□□□□□ -0.48
TOP3A-217ENST00000584582 TMED2Q15363 201 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 ZNF667Q5HYK9 610 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 GPAT2Q6NUI2 795 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 PNMA8AQ86V59 439 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-217ENST00000584582 SRRM1Q8IYB3 904 aaKnown RBP12.03□□□□□ -0.48
TOP3A-217ENST00000584582 SLC17A8Q8NDX2 589 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 RSAD2Q8WXG1 361 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 MRPL4Q9BYD3 311 aaKnown RBP12.03□□□□□ -0.48
TOP3A-217ENST00000584582 PDGFCQ9NRA1 345 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 SAE1Q9UBE0 346 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-217ENST00000584582 PCDHB2Q9Y5E7 798 aa12.03□□□□□ -0.48
TOP3A-217ENST00000584582 ZNF286BP0CG31 522 aa12.02□□□□□ -0.48
TOP3A-217ENST00000584582 GTF2BQ00403 316 aa12.02□□□□□ -0.48
TOP3A-217ENST00000584582 DUOXA2Q1HG44 320 aa12.02□□□□□ -0.48
TOP3A-217ENST00000584582 TTC31Q49AM3 519 aaPredicted RBP12.02□□□□□ -0.48
TOP3A-217ENST00000584582 MAP1SQ66K74 1059 aaPredicted RBP12.02□□□□□ -0.48
TOP3A-217ENST00000584582 ZC3H18Q86VM9 953 aaKnown RBP12.02□□□□□ -0.48
TOP3A-217ENST00000584582 TMEM130Q8N3G9 435 aa12.02□□□□□ -0.48
TOP3A-217ENST00000584582 KLRG1Q96E93 195 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms