RNA–Protein interactions for RNA: ENST00000584243.5

GGA3-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-218ENST00000584243 VIPAS39Q9H9C1 493 aa8.8□□□□□ -1
GGA3-218ENST00000584243 PRMT8Q9NR22 394 aaPredicted RBP8.8□□□□□ -1
GGA3-218ENST00000584243 ARHGEF3Q9NR81 526 aa8.8□□□□□ -1
GGA3-218ENST00000584243 BZW2Q9Y6E2 419 aaKnown RBP8.8□□□□□ -1
GGA3-218ENST00000584243 UBE4BO95155 1302 aa8.8□□□□□ -1
GGA3-218ENST00000584243 SHROOM3Q8TF72 1996 aa8.79□□□□□ -1
GGA3-218ENST00000584243 CSMD1Q96PZ7 3565 aa8.79□□□□□ -1
GGA3-218ENST00000584243 SOWAHDA6NJG2 315 aa8.79□□□□□ -1
GGA3-218ENST00000584243 TACC1O75410 805 aa8.79□□□□□ -1
GGA3-218ENST00000584243 MAFO75444 373 aaPredicted RBP8.79□□□□□ -1
GGA3-218ENST00000584243 TCP1P17987 556 aaKnown RBP8.79□□□□□ -1
GGA3-218ENST00000584243 RPL13P26373 211 aaKnown RBP8.79□□□□□ -1
GGA3-218ENST00000584243 SHMT1P34896 483 aa8.79□□□□□ -1
GGA3-218ENST00000584243 BTG3Q14201 252 aaPredicted RBP8.79□□□□□ -1
GGA3-218ENST00000584243 HIC1Q14526 733 aa8.79□□□□□ -1
GGA3-218ENST00000584243 ERCC6LQ2NKX8 1250 aa8.79□□□□□ -1
GGA3-218ENST00000584243 Q4G0T1 1027 aa8.79□□□□□ -1
GGA3-218ENST00000584243 HSP90B2PQ58FF3 399 aa8.79□□□□□ -1
GGA3-218ENST00000584243 COLEC12Q5KU26 742 aa8.79□□□□□ -1
GGA3-218ENST00000584243 TYW1BQ6NUM6 668 aa8.79□□□□□ -1
GGA3-218ENST00000584243 HDXQ7Z353 690 aa8.79□□□□□ -1
GGA3-218ENST00000584243 KIAA1328Q86T90 577 aa8.79□□□□□ -1
GGA3-218ENST00000584243 CLEC10AQ8IUN9 316 aa8.79□□□□□ -1
GGA3-218ENST00000584243 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.79□□□□□ -1
GGA3-218ENST00000584243 GOLGA5Q8TBA6 731 aa8.79□□□□□ -1
GGA3-218ENST00000584243 SNX29Q8TEQ0 813 aa8.79□□□□□ -1
GGA3-218ENST00000584243 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.79□□□□□ -1
GGA3-218ENST00000584243 MBOAT7Q96N66 472 aa8.79□□□□□ -1
GGA3-218ENST00000584243 PIGSQ96S52 555 aa8.79□□□□□ -1
GGA3-218ENST00000584243 CARD6Q9BX69 1037 aa8.79□□□□□ -1
GGA3-218ENST00000584243 TTYH3Q9C0H2 523 aa8.79□□□□□ -1
GGA3-218ENST00000584243 MAF1Q9H063 256 aa8.79□□□□□ -1
GGA3-218ENST00000584243 VPS16Q9H269 839 aa8.79□□□□□ -1
GGA3-218ENST00000584243 METTL14Q9HCE5 456 aaKnown RBP8.79□□□□□ -1
GGA3-218ENST00000584243 MED4Q9NPJ6 270 aa8.79□□□□□ -1
GGA3-218ENST00000584243 SCUBE2Q9NQ36 999 aa8.79□□□□□ -1
GGA3-218ENST00000584243 TAB2Q9NYJ8 693 aa8.79□□□□□ -1
GGA3-218ENST00000584243 RAB21Q9UL25 225 aa8.79□□□□□ -1
GGA3-218ENST00000584243 PPP1R9AQ9ULJ8 1098 aa8.79□□□□□ -1
GGA3-218ENST00000584243 PCDHA12Q9UN75 941 aa8.79□□□□□ -1
GGA3-218ENST00000584243 JRKLQ9Y4A0 524 aa8.79□□□□□ -1
GGA3-218ENST00000584243 LRBAP50851 2863 aa8.79□□□□□ -1
GGA3-218ENST00000584243 MIA3Q5JRA6 1907 aa8.79□□□□□ -1
GGA3-218ENST00000584243 USP9YO00507 2555 aaPredicted RBP8.79□□□□□ -1
GGA3-218ENST00000584243 NAV3Q8IVL0 2385 aa8.79□□□□□ -1
GGA3-218ENST00000584243 CACNA1EQ15878 2313 aa8.79□□□□□ -1
GGA3-218ENST00000584243 GREB1Q4ZG55 1949 aa8.78□□□□□ -1
GGA3-218ENST00000584243 SPDYE3A6NKU9 549 aa8.78□□□□□ -1
GGA3-218ENST00000584243 ENO4A6NNW6 628 aa8.78□□□□□ -1
GGA3-218ENST00000584243 PIK3CDO00329 1044 aa8.78□□□□□ -1
GGA3-218ENST00000584243 PES1O00541 588 aaKnown RBP8.78□□□□□ -1
GGA3-218ENST00000584243 SLC16A3O15427 465 aaKnown RBP8.78□□□□□ -1
GGA3-218ENST00000584243 TEX33O43247 280 aa8.78□□□□□ -1
GGA3-218ENST00000584243 FOXD2O60548 495 aaPredicted RBP8.78□□□□□ -1
GGA3-218ENST00000584243 PLA2G6O60733 806 aa8.78□□□□□ -1
GGA3-218ENST00000584243 GFPT2O94808 682 aa8.78□□□□□ -1
GGA3-218ENST00000584243 ZRANB2O95218 330 aaKnown RBP eCLIP8.78□□□□□ -1
GGA3-218ENST00000584243 LCA5LO95447 670 aa8.78□□□□□ -1
GGA3-218ENST00000584243 CCDC172P0C7W6 258 aa8.78□□□□□ -1
GGA3-218ENST00000584243 GAP43P17677 238 aa8.78□□□□□ -1
GGA3-218ENST00000584243 POU3F2P20265 443 aaPredicted RBP8.78□□□□□ -1
GGA3-218ENST00000584243 MTHFRP42898 656 aa8.78□□□□□ -1
GGA3-218ENST00000584243 SLC1A4P43007 532 aa8.78□□□□□ -1
GGA3-218ENST00000584243 CPT1AP50416 773 aa8.78□□□□□ -1
GGA3-218ENST00000584243 VAV2P52735 878 aa8.78□□□□□ -1
GGA3-218ENST00000584243 CCDC96Q2M329 555 aa8.78□□□□□ -1
GGA3-218ENST00000584243 CERKLQ49MI3 558 aaPredicted RBP8.78□□□□□ -1
GGA3-218ENST00000584243 ZNF569Q5MCW4 686 aa8.78□□□□□ -1
GGA3-218ENST00000584243 PAPD7Q5XG87 772 aaKnown RBP8.78□□□□□ -1
GGA3-218ENST00000584243 SMYD5Q6GMV2 418 aa8.78□□□□□ -1
GGA3-218ENST00000584243 RAD9BQ6WBX8 426 aa8.78□□□□□ -1
GGA3-218ENST00000584243 VPS36Q86VN1 386 aa8.78□□□□□ -1
GGA3-218ENST00000584243 ADGRF4Q8IZF3 695 aa8.78□□□□□ -1
GGA3-218ENST00000584243 CELF5Q8N6W0 485 aaKnown RBP8.78□□□□□ -1
GGA3-218ENST00000584243 C12orf76Q8N812 135 aaPredicted RBP8.78□□□□□ -1
GGA3-218ENST00000584243 KAT2BQ92831 832 aa8.78□□□□□ -1
GGA3-218ENST00000584243 PCMTD1Q96MG8 357 aaPredicted RBP8.78□□□□□ -1
GGA3-218ENST00000584243 TEX13BQ9BXU2 312 aa8.78□□□□□ -1
GGA3-218ENST00000584243 TMEM60Q9H2L4 133 aa8.78□□□□□ -1
GGA3-218ENST00000584243 NDST4Q9H3R1 872 aa8.78□□□□□ -1
GGA3-218ENST00000584243 DEF6Q9H4E7 631 aa8.78□□□□□ -1
GGA3-218ENST00000584243 LZTFL1Q9NQ48 299 aa8.78□□□□□ -1
GGA3-218ENST00000584243 SEL1LQ9UBV2 794 aa8.78□□□□□ -1
GGA3-218ENST00000584243 FBXL5Q9UKA1 691 aa8.78□□□□□ -1
GGA3-218ENST00000584243 RAB23Q9ULC3 237 aa8.78□□□□□ -1
GGA3-218ENST00000584243 SAR1BQ9Y6B6 198 aa8.78□□□□□ -1
GGA3-218ENST00000584243 SDK1Q7Z5N4 2213 aa8.78□□□□□ -1
GGA3-218ENST00000584243 COL6A6A6NMZ7 2263 aa8.78□□□□□ -1
GGA3-218ENST00000584243 EMSYQ7Z589 1322 aa8.78□□□□□ -1
GGA3-218ENST00000584243 TTC26A0AVF1 554 aa8.77□□□□□ -1.01
GGA3-218ENST00000584243 FAM221BA6H8Z2 402 aa8.77□□□□□ -1.01
GGA3-218ENST00000584243 A6NJR5 290 aa8.77□□□□□ -1.01
GGA3-218ENST00000584243 HIDE1A8MVS5 230 aa8.77□□□□□ -1.01
GGA3-218ENST00000584243 CES2O00748 559 aa8.77□□□□□ -1.01
GGA3-218ENST00000584243 N4BP1O75113 896 aaKnown RBP8.77□□□□□ -1.01
GGA3-218ENST00000584243 PNMA6AP0CW24 399 aaPredicted RBP8.77□□□□□ -1.01
GGA3-218ENST00000584243 ZSCAN20P17040 1043 aaPredicted RBP8.77□□□□□ -1.01
GGA3-218ENST00000584243 CIITAP33076 1130 aa8.77□□□□□ -1.01
GGA3-218ENST00000584243 ABCD1P33897 745 aa8.77□□□□□ -1.01
GGA3-218ENST00000584243 TXKP42681 527 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms