RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 ARIH1Q9Y4X5 557 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 MYH7BA7E2Y1 1941 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NID2Q14112 1375 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 E9PBE3 544 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 H0YGN5 161 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 B3GALNT1O75752 331 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 LMNAP02545 664 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PBX1P40424 430 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SKIV2L2P42285 1042 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 MXI1P50539 228 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GABPAQ06546 454 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ZYXQ15942 572 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SLC35G1Q2M3R5 365 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SNX30Q5VWJ9 437 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ST13P4Q8IZP2 240 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 BBS5Q8N3I7 341 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GSDMAQ96QA5 445 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ETNK1Q9HBU6 452 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 EPB41L5Q9HCM4 733 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ABHD10Q9NUJ1 306 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 RNF181Q9P0P0 153 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NFS1Q9Y697 457 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SMIM31A0A1B0GVY4 71 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ESYT3A0FGR9 886 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 HLA-DOAP06340 250 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GLI1P08151 1106 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CPA3P15088 417 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SNAP25P60880 206 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 BOLA3Q53S33 107 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 WASHC2DQ5SRD0 308 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 FAM47EQ6ZV65 393 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NUP93Q8N1F7 819 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ACMSDQ8TDX5 336 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GIPC2Q8TF65 315 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GPKOWQ92917 476 aaPredicted RBP eCLIP12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 VMP1Q96GC9 406 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PAGE5Q96GU1 130 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ANKRD36BP1Q96IX9 119 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 STK33Q9BYT3 514 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ASCC2Q9H1I8 757 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DPH5Q9H2P9 285 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 FKBP14Q9NWM8 211 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CLIC5Q9NZA1 410 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GTF3C4Q9UKN8 822 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SNX12Q9UMY4 172 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 IVNS1ABPQ9Y6Y0 642 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TRIM75PA6NK02 468 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NOTOA8MTQ0 251 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DCDC2CA8MYV0 355 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SNX3O60493 162 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 COBLO75128 1261 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TAL1P17542 331 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 POLR2EP19388 210 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PRKACBP22694 351 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ITGA9Q13797 1035 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TNIP1Q15025 636 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 MYLK3Q32MK0 819 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 B3GNT6Q6ZMB0 384 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 FAM13CQ8NE31 585 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CFAP61Q8NHU2 1237 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TRPM4Q8TD43 1214 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NUP88Q99567 741 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 MRIQ9BWK5 157 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 LRRC27Q9C0I9 530 aa12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 USP15Q9Y4E8 981 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NAV1Q8NEY1 1877 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DDX60LQ5H9U9 1706 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PASKQ96RG2 1323 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DICER1Q9UPY3 1922 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 HEXIM1O94992 359 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 HSD17B3P37058 310 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GPC3P51654 580 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 RASA2Q15283 850 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SYCP2LQ5T4T6 812 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TTC8Q8TAM2 541 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SYMPKQ92797 1274 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CCSER1Q9C0I3 900 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SELENONQ9NZV5 590 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SATB2Q9UPW6 733 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 FZD9O00144 591 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 KRT86O43790 486 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GH2P01242 217 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CTNNA1P35221 906 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ACADSBP45954 432 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NAA20P61599 178 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DGKZQ13574 1117 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CERKLQ49MI3 558 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 EARS2Q5JPH6 523 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CDKAL1Q5VV42 579 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TTBK2Q6IQ55 1244 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 KCTD1Q719H9 257 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TAOK1Q7L7X3 1001 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 STAMQ92783 540 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 VPS50Q96JG6 964 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms