RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZBTB39O15060 712 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 ZC3H11AO75152 810 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC47-206ENST00000584112 AXLP30530 894 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 NRLP54845 237 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 BCAR1P56945 870 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 POU5F1BQ06416 359 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 HTR4Q13639 388 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 SLC44A4Q53GD3 710 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 TCEAL6Q6IPX3 200 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 LPPQ93052 612 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 TCEAL3Q969E4 200 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 CCDC51Q96ER9 411 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 KLHL5Q96PQ7 755 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 MINDY3Q9H8M7 445 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 TUFT1Q9NNX1 390 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 PCDHB2Q9Y5E7 798 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 F5P12259 2224 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 WNT7AO00755 349 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 ATP2B1P20020 1258 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 TRAPPC10P48553 1259 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 RARRES1P49788 294 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 PTENP60484 403 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 ADCY1Q08828 1119 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 MRPL10Q7Z7H8 261 aaKnown RBP12.33□□□□□ -0.44
CCDC47-206ENST00000584112 IFNLR1Q8IU57 520 aaPredicted RBP12.33□□□□□ -0.44
CCDC47-206ENST00000584112 ZNF843Q8N446 348 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 FBXO18Q8NFZ0 1043 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 ERMNQ8TAM6 284 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 SPATA18Q8TC71 538 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 NXPE3Q969Y0 559 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 TMEM60Q9H2L4 133 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 CLMPQ9H6B4 373 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 RSAD1Q9HA92 442 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 UBN1Q9NPG3 1134 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 XPNPEP1Q9NQW7 623 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 TBC1D13Q9NVG8 400 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 KANSL3Q9P2N6 904 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 STK39Q9UEW8 545 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 NOL7Q9UMY1 257 aaKnown RBP12.33□□□□□ -0.44
CCDC47-206ENST00000584112 INPP5FQ9Y2H2 1132 aa12.33□□□□□ -0.44
CCDC47-206ENST00000584112 PCNX2A6NKB5 2137 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 NOTCH2Q04721 2471 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 ASCC3Q8N3C0 2202 aaKnown RBP12.32□□□□□ -0.44
CCDC47-206ENST00000584112 C4orf47A7E2U8 309 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 NT5C1B-RDH14C9J2C7 533 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 ANHXE9PGG2 379 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 OFD1O75665 1012 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 OR52Z1P0C646 297 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 HOXA11P31270 313 aaPredicted RBP12.32□□□□□ -0.44
CCDC47-206ENST00000584112 PRKCQQ04759 706 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 CAPSQ13938 189 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 LONRF3Q496Y0 759 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 TTC38Q5R3I4 469 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 NOTUMQ6P988 496 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 AGMOQ6ZNB7 445 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 NOSTRINQ8IVI9 506 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 MCPH1Q8NEM0 835 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 PIGOQ8TEQ8 1089 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 NACC1Q96RE7 527 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 KIF2CQ99661 725 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 POLR3CQ9BUI4 534 aaPredicted RBP12.32□□□□□ -0.44
CCDC47-206ENST00000584112 NFKBIZQ9BYH8 718 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 NRDE2Q9H7Z3 1164 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 RAXQ9Y2V3 346 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 KIF3AQ9Y496 699 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 CLUHO75153 1309 aa12.32□□□□□ -0.44
CCDC47-206ENST00000584112 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
CCDC47-206ENST00000584112 MEIS3P2A8K0S8 358 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 INO80B-WBP1J3KQ70 363 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 TSPAN1O60635 241 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 USO1O60763 962 aaKnown RBP12.31□□□□□ -0.44
CCDC47-206ENST00000584112 GALTP07902 379 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 SPATA31C1P0DKV0 1188 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 MYBP10242 640 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 ITGA4P13612 1032 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 MUTP22033 750 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 RPA1P27694 616 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 HOXC13P31276 330 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 ARL2P36404 184 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 RPS9P46781 194 aaKnown RBP12.31□□□□□ -0.44
CCDC47-206ENST00000584112 MBTD1Q05BQ5 628 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 SCAPQ12770 1279 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 GIT2Q14161 759 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 RABEP1Q15276 862 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 ZNF174Q15697 407 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 UBXN11Q5T124 520 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 HAUS3Q68CZ6 603 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 HEATR6Q6AI08 1181 aaKnown RBP12.31□□□□□ -0.44
CCDC47-206ENST00000584112 CEP68Q76N32 757 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 DDX53Q86TM3 631 aaKnown RBP12.31□□□□□ -0.44
CCDC47-206ENST00000584112 CATSPER3Q86XQ3 398 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 HACE1Q8IYU2 909 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 TMEM87AQ8NBN3 555 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 IGSF21Q96ID5 467 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 FAM193BQ96PV7 902 aaPredicted RBP12.31□□□□□ -0.44
CCDC47-206ENST00000584112 TMEM175Q9BSA9 504 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 TRIM6Q9C030 488 aaPredicted RBP12.31□□□□□ -0.44
CCDC47-206ENST00000584112 GBP3Q9H0R5 595 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms