RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	RAD9A	Q99638	391 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	CWH43	Q9H720	699 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	RPF1	Q9H9Y2	349 aa	Known RBP	10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	CBX8	Q9HC52	389 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	RBAK	Q9NYW8	714 aa	Predicted RBP	10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	KANSL3	Q9P2N6	904 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	PLAGL2	Q9UPG8	496 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	COQ4	Q9Y3A0	265 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	NFE2L3	Q9Y4A8	694 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	SLC4A7	Q9Y6M7	1214 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	ANK1	P16157	1881 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	PTPRJ	Q12913	1337 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	ANO9	A1A5B4	782 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	GOLGA8IP	A6NC78	632 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	GOLGA8J	A6NMD2	632 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	B4GALT3	O60512	393 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	C4BPA	P04003	597 aa	Known RBP	10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	FGFR1	P11362	822 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	ATP2A2	P16615	1042 aa	Known RBP	10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	EEF1G	P26641	437 aa	Known RBP	10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	KCNJ6	P48051	423 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	AP3M2	P53677	418 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	BFSP1	Q12934	665 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	GRIK3	Q13003	919 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	CAMK2B	Q13554	666 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	LRIT3	Q3SXY7	679 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	GLB1L	Q6UWU2	654 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	GAS2L3	Q86XJ1	694 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	WDR49	Q8IV35	697 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	COLGALT2	Q8IYK4	626 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	FAM186B	Q8IYM0	893 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	TDH	Q8IZJ6	230 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	ZFP42	Q96MM3	310 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	CGRRF1	Q99675	332 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	UBE2O	Q9C0C9	1292 aa	Known RBP	10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	PDE11A	Q9HCR9	933 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	SAMSN1	Q9NSI8	373 aa	Known RBP	10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	TBC1D13	Q9NVG8	400 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	INTS13	Q9NVM9	706 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	FANCL	Q9NW38	375 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	LIMA1	Q9UHB6	759 aa	Known RBP	10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	FRMD4B	Q9Y2L6	1034 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	INSL6	Q9Y581	213 aa		10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.82	□□□□□ -0.68
EIF4A1-231	ENST00000584054	PDCD11	Q14690	1871 aa	Known RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	SMTNL1	A8MU46	457 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	TMEM189-UBE2V1	I3L0A0	370 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	PIR	O00625	290 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	DDHD2	O94830	711 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	STAU1	O95793	577 aa	Known RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	TH	P07101	528 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	MLH1	P40692	756 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	AARS	P49588	968 aa	Known RBP eCLIP	10.81	□□□□□ -0.68	7e-6	■■□□□ 13.7
EIF4A1-231	ENST00000584054	VAMP7	P51809	220 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	YARS	P54577	528 aa	Known RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	OSTN	P61366	133 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	DLG4	P78352	724 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	PPP2R3A	Q06190	1150 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	SOX4	Q06945	474 aa	Predicted RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	PPP3CA	Q08209	521 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	ZACN	Q401N2	412 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	TCP11X2	Q5H9J9	407 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	MIIP	Q5JXC2	388 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	DPY19L2P1	Q6NXN4	242 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	LIMS2	Q7Z4I7	341 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	RNF168	Q8IYW5	571 aa	Predicted RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	HELQ	Q8TDG4	1101 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	EEF2KMT	Q96G04	330 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	TMEM175	Q9BSA9	504 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	MRPL9	Q9BYD2	267 aa	Known RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	TSPY26P	Q9H489	355 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	NRDE2	Q9H7Z3	1164 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	VRTN	Q9H8Y1	702 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	PARP2	Q9UGN5	583 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	SIX4	Q9UIU6	781 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	UBQLN1	Q9UMX0	589 aa	Known RBP	10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	PCDHA11	Q9Y5I1	949 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	LAMA3	Q16787	3333 aa		10.81	□□□□□ -0.68
EIF4A1-231	ENST00000584054	CARNS1	A5YM72	827 aa		10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	P4HA2	O15460	535 aa		10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	NFIC	P08651	508 aa		10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	EPB41	P11171	864 aa	Known RBP	10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	HARS	P12081	509 aa	Known RBP	10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	PAX3	P23760	479 aa		10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	RPL9	P32969	192 aa	Known RBP	10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	MLLT3	P42568	568 aa	Predicted RBP	10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	GATM	P50440	423 aa		10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	SCNN1G	P51170	649 aa		10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	SMAD3	P84022	425 aa	Known RBP	10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	TUSC3	Q13454	348 aa		10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	UPP1	Q16831	310 aa		10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	DUOXA2	Q1HG44	320 aa		10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	PRPF38B	Q5VTL8	546 aa	Known RBP	10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	CEP135	Q66GS9	1140 aa		10.8	□□□□□ -0.68
EIF4A1-231	ENST00000584054	JADE1	Q6IE81	842 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms