RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 CPB2Q96IY4 423 aa9.96□□□□□ -0.82
CASC3-209ENST00000583902 PAWRQ96IZ0 340 aaKnown RBP9.96□□□□□ -0.82
CASC3-209ENST00000583902 HTATIP2Q9BUP3 242 aa9.96□□□□□ -0.82
CASC3-209ENST00000583902 VRTNQ9H8Y1 702 aa9.96□□□□□ -0.82
CASC3-209ENST00000583902 TMEM39AQ9NV64 488 aa9.96□□□□□ -0.82
CASC3-209ENST00000583902 KANSL3Q9P2N6 904 aa9.96□□□□□ -0.82
CASC3-209ENST00000583902 PRKAG2Q9UGJ0 569 aa9.96□□□□□ -0.82
CASC3-209ENST00000583902 ITGA11Q9UKX5 1188 aa9.96□□□□□ -0.82
CASC3-209ENST00000583902 CAPN11Q9UMQ6 739 aa9.96□□□□□ -0.82
CASC3-209ENST00000583902 SIK3Q9Y2K2 1263 aa9.96□□□□□ -0.82
CASC3-209ENST00000583902 LUC7L2Q9Y383 392 aaKnown RBP9.96□□□□□ -0.82
CASC3-209ENST00000583902 PCDHB2Q9Y5E7 798 aa9.96□□□□□ -0.82
CASC3-209ENST00000583902 BZW2Q9Y6E2 419 aaKnown RBP9.96□□□□□ -0.82
CASC3-209ENST00000583902 CEP350Q5VT06 3117 aa9.96□□□□□ -0.82
CASC3-209ENST00000583902 TRIP11Q15643 1979 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 TTC3P53804 2025 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 ARHGEF37A1IGU5 675 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 GOLGA8IPA6NC78 632 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 GOLGA8JA6NMD2 632 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 LRRIQ3A6PVS8 624 aaPredicted RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 TISP43B9A030 160 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 AKR1B15C9JRZ8 316 aaPredicted RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 AP5Z1O43299 807 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 TIMP1P01033 207 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 MYCP01106 439 aaPredicted RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 C4BPAP04003 597 aaKnown RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 EDN1P05305 212 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 PTMAP06454 111 aaKnown RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 CTSHP09668 335 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 DLATP10515 647 aaKnown RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 GHRP10912 638 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 ITGA4P13612 1032 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 P4HA1P13674 534 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 ANXA13P27216 316 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 YWHAEP62258 255 aaKnown RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 CDK17Q00537 523 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 GCNT1Q02742 428 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 TBX2Q13207 712 aaPredicted RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 TMEM132DQ14C87 1099 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 SYCP1Q15431 976 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 ENOX2Q16206 610 aaKnown RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 SGSM1Q2NKQ1 1148 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 SLC10A6Q3KNW5 377 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 SV2AQ7L0J3 742 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 TMC6Q7Z403 805 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 TMEM199Q8N511 208 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 BEST2Q8NFU1 509 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 CCDC127Q96BQ5 260 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 EEF2KMTQ96G04 330 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 DDX27Q96GQ7 796 aaKnown RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 SNX27Q96L92 541 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 PCMTD1Q96MG8 357 aaPredicted RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 PANX2Q96RD6 677 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 PPP1R16BQ96T49 567 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 HAPLN2Q9GZV7 340 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 TMEM117Q9H0C3 514 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 ZNHIT6Q9NWK9 470 aaKnown RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 RAB20Q9NX57 234 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 GCNT4Q9P109 453 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 PCDH10Q9P2E7 1040 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 UBQLN1Q9UMX0 589 aaKnown RBP9.95□□□□□ -0.82
CASC3-209ENST00000583902 IPPQ9Y573 584 aa9.95□□□□□ -0.82
CASC3-209ENST00000583902 ABHD14A-ACY1A0A1B0GW23 586 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 TEX33O43247 280 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 PHACTR2O75167 634 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 BAIAP3O94812 1187 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 CXCL8P10145 99 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 HARSP12081 509 aaKnown RBP9.94□□□□□ -0.82
CASC3-209ENST00000583902 ACTN1P12814 892 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 PON1P27169 355 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 CD52P31358 61 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 HNRNPH3P31942 346 aaKnown RBP9.94□□□□□ -0.82
CASC3-209ENST00000583902 RPL9P32969 192 aaKnown RBP9.94□□□□□ -0.82
CASC3-209ENST00000583902 GCLMP48507 274 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 RBP5P82980 135 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 MYO1EQ12965 1108 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 TRPC3Q13507 836 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 EPC2Q52LR7 807 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 C1orf220Q5T0J3 134 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 UBXN11Q5T124 520 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 CNKSR3Q6P9H4 555 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 TRIM65Q6PJ69 517 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 CACNA2D4Q7Z3S7 1137 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 LRRC52Q8N7C0 313 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 OR8K1Q8NGG5 319 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 SPATA18Q8TC71 538 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 TRIM44Q96DX7 344 aaPredicted RBP9.94□□□□□ -0.82
CASC3-209ENST00000583902 ZNF668Q96K58 619 aaPredicted RBP9.94□□□□□ -0.82
CASC3-209ENST00000583902 ZNF560Q96MR9 790 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 UROC1Q96N76 676 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 NT5C1BQ96P26 610 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 RPS6KC1Q96S38 1066 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 ADAM2Q99965 735 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 STK33Q9BYT3 514 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 TTYH3Q9C0H2 523 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 MMRN2Q9H8L6 949 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 AGO3Q9H9G7 860 aaKnown RBP9.94□□□□□ -0.82
CASC3-209ENST00000583902 PDE11AQ9HCR9 933 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 TMEM161AQ9NX61 479 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 APEX2Q9UBZ4 518 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms