RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 RECQL4O94761 1208 aa22.55■■□□□ 1.2
SRSF1-206ENST00000583741 EDN1P05305 212 aa22.55■■□□□ 1.2
SRSF1-206ENST00000583741 FAM187BQ17R55 369 aa22.55■■□□□ 1.2
SRSF1-206ENST00000583741 PPM1LQ5SGD2 360 aa22.55■■□□□ 1.2
SRSF1-206ENST00000583741 ITFG1Q8TB96 612 aa22.55■■□□□ 1.2
SRSF1-206ENST00000583741 BSNDQ8WZ55 320 aa22.55■■□□□ 1.2
SRSF1-206ENST00000583741 CHAMP1Q96JM3 812 aa22.55■■□□□ 1.2
SRSF1-206ENST00000583741 XRCC6P12956 609 aaKnown RBP eCLIP22.54■■□□□ 1.2
SRSF1-206ENST00000583741 IGFBP6P24592 240 aaPredicted RBP22.54■■□□□ 1.2
SRSF1-206ENST00000583741 DNM1Q05193 864 aaKnown RBP22.54■■□□□ 1.2
SRSF1-206ENST00000583741 SNW1Q13573 536 aaKnown RBP22.54■■□□□ 1.2
SRSF1-206ENST00000583741 ZC3H14Q6PJT7 736 aaKnown RBP22.54■■□□□ 1.2
SRSF1-206ENST00000583741 SLC7A14Q8TBB6 771 aa22.54■■□□□ 1.2
SRSF1-206ENST00000583741 TMEM60Q9H2L4 133 aa22.54■■□□□ 1.2
SRSF1-206ENST00000583741 POLIQ9UNA4 740 aa22.54■■□□□ 1.2
SRSF1-206ENST00000583741 THP07101 528 aa22.54■■□□□ 1.2
SRSF1-206ENST00000583741 HOXA9P31269 272 aa22.54■■□□□ 1.2
SRSF1-206ENST00000583741 ZBTB8OSQ8IWT0 167 aa22.54■■□□□ 1.2
SRSF1-206ENST00000583741 MCPH1Q8NEM0 835 aa22.54■■□□□ 1.2
SRSF1-206ENST00000583741 HCFC1R1Q9NWW0 138 aa22.54■■□□□ 1.2
SRSF1-206ENST00000583741 N4BP3O15049 544 aa22.53■■□□□ 1.2
SRSF1-206ENST00000583741 MED24O75448 989 aa22.53■■□□□ 1.2
SRSF1-206ENST00000583741 ATP2B1P20020 1258 aa22.53■■□□□ 1.2
SRSF1-206ENST00000583741 KRT85P78386 507 aa22.53■■□□□ 1.2
SRSF1-206ENST00000583741 AXDND1Q5T1B0 1012 aaPredicted RBP22.53■■□□□ 1.2
SRSF1-206ENST00000583741 CATSPER3Q86XQ3 398 aa22.53■■□□□ 1.2
SRSF1-206ENST00000583741 DCLK2Q8N568 766 aa22.53■■□□□ 1.2
SRSF1-206ENST00000583741 SHDQ96IW2 340 aa22.53■■□□□ 1.2
SRSF1-206ENST00000583741 DDX23Q9BUQ8 820 aaKnown RBP22.53■■□□□ 1.2
SRSF1-206ENST00000583741 CCDC113Q9H0I3 377 aa22.53■■□□□ 1.2
SRSF1-206ENST00000583741 MTF2Q9Y483 593 aaPredicted RBP22.53■■□□□ 1.2
SRSF1-206ENST00000583741 KANSL1LA0AUZ9 987 aa22.52■■□□□ 1.2
SRSF1-206ENST00000583741 PRPF4BQ13523 1007 aaKnown RBP22.52■■□□□ 1.2
SRSF1-206ENST00000583741 MLF2Q15773 248 aaPredicted RBP22.52■■□□□ 1.2
SRSF1-206ENST00000583741 EEF1DP3Q658K8 133 aa22.52■■□□□ 1.2
SRSF1-206ENST00000583741 MTSS1LQ765P7 747 aa22.52■■□□□ 1.2
SRSF1-206ENST00000583741 SUMF1Q8NBK3 374 aa22.52■■□□□ 1.2
SRSF1-206ENST00000583741 ZNF396Q96N95 335 aaPredicted RBP22.52■■□□□ 1.2
SRSF1-206ENST00000583741 HINFPQ9BQA5 517 aa22.52■■□□□ 1.2
SRSF1-206ENST00000583741 KXD1Q9BQD3 176 aa22.52■■□□□ 1.2
SRSF1-206ENST00000583741 MED19A0JLT2 244 aaPredicted RBP22.51■■□□□ 1.19
SRSF1-206ENST00000583741 XYLBO75191 536 aa22.51■■□□□ 1.19
SRSF1-206ENST00000583741 PRKCBP05771 671 aa22.51■■□□□ 1.19
SRSF1-206ENST00000583741 OR1D2P34982 312 aa22.51■■□□□ 1.19
SRSF1-206ENST00000583741 ELAVL2Q12926 359 aaKnown RBP22.51■■□□□ 1.19
SRSF1-206ENST00000583741 MAPK6Q16659 721 aa22.51■■□□□ 1.19
SRSF1-206ENST00000583741 TMEM132AQ24JP5 1023 aa22.51■■□□□ 1.19
SRSF1-206ENST00000583741 ATL3Q6DD88 541 aa22.51■■□□□ 1.19
SRSF1-206ENST00000583741 RSPO2Q6UXX9 243 aaPredicted RBP22.51■■□□□ 1.19
SRSF1-206ENST00000583741 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.51■■□□□ 1.19
SRSF1-206ENST00000583741 NPAS3Q8IXF0 933 aa22.51■■□□□ 1.19
SRSF1-206ENST00000583741 RUBCNQ92622 972 aa22.51■■□□□ 1.19
SRSF1-206ENST00000583741 C2orf40Q9H1Z8 148 aa22.51■■□□□ 1.19
SRSF1-206ENST00000583741 GDAQ9Y2T3 454 aa22.51■■□□□ 1.19
SRSF1-206ENST00000583741 GOLGA6L22H0YM25 854 aa22.5■■□□□ 1.19
SRSF1-206ENST00000583741 POU2F2P09086 479 aa22.5■■□□□ 1.19
SRSF1-206ENST00000583741 LIG1P18858 919 aa22.5■■□□□ 1.19
SRSF1-206ENST00000583741 FGFR3P22607 806 aa22.5■■□□□ 1.19
SRSF1-206ENST00000583741 RAB33AQ14088 237 aa22.5■■□□□ 1.19
SRSF1-206ENST00000583741 SLC44A4Q53GD3 710 aa22.5■■□□□ 1.19
SRSF1-206ENST00000583741 PDXDC1Q6P996 788 aa22.5■■□□□ 1.19
SRSF1-206ENST00000583741 TUFT1Q9NNX1 390 aa22.5■■□□□ 1.19
SRSF1-206ENST00000583741 DNMT3BQ9UBC3 853 aaKnown RBP22.5■■□□□ 1.19
SRSF1-206ENST00000583741 ACKR2O00590 384 aa22.49■■□□□ 1.19
SRSF1-206ENST00000583741 CD72P21854 359 aa22.49■■□□□ 1.19
SRSF1-206ENST00000583741 UBXN2BQ14CS0 331 aa22.49■■□□□ 1.19
SRSF1-206ENST00000583741 PABPC1LQ4VXU2 614 aaKnown RBP22.49■■□□□ 1.19
SRSF1-206ENST00000583741 GLRA4Q5JXX5 417 aa22.49■■□□□ 1.19
SRSF1-206ENST00000583741 CD300LGQ6UXG3 332 aa22.49■■□□□ 1.19
SRSF1-206ENST00000583741 ING5Q8WYH8 240 aa22.49■■□□□ 1.19
SRSF1-206ENST00000583741 ADPGKQ9BRR6 497 aa22.49■■□□□ 1.19
SRSF1-206ENST00000583741 KIFC3Q9BVG8 833 aa22.49■■□□□ 1.19
SRSF1-206ENST00000583741 SPATA6Q9NWH7 488 aaPredicted RBP22.49■■□□□ 1.19
SRSF1-206ENST00000583741 MTRRQ9UBK8 725 aa22.49■■□□□ 1.19
SRSF1-206ENST00000583741 CFAP45Q9UL16 551 aa22.49■■□□□ 1.19
SRSF1-206ENST00000583741 CDY1Q9Y6F8 540 aa22.49■■□□□ 1.19
SRSF1-206ENST00000583741 MCM4P33991 863 aa22.48■■□□□ 1.19
SRSF1-206ENST00000583741 MCM7P33993 719 aa22.48■■□□□ 1.19
SRSF1-206ENST00000583741 PRKCQQ04759 706 aa22.48■■□□□ 1.19
SRSF1-206ENST00000583741 NFKBIBQ15653 356 aa22.48■■□□□ 1.19
SRSF1-206ENST00000583741 RILPL1Q5EBL4 403 aa22.48■■□□□ 1.19
SRSF1-206ENST00000583741 POTEHQ6S545 545 aa22.48■■□□□ 1.19
SRSF1-206ENST00000583741 PADI6Q6TGC4 694 aa22.48■■□□□ 1.19
SRSF1-206ENST00000583741 DGLUCYQ7Z3D6 616 aa22.48■■□□□ 1.19
SRSF1-206ENST00000583741 PPP1R10Q96QC0 940 aaKnown RBP22.48■■□□□ 1.19
SRSF1-206ENST00000583741 NACC1Q96RE7 527 aa22.48■■□□□ 1.19
SRSF1-206ENST00000583741 USP28Q96RU2 1077 aa22.48■■□□□ 1.19
SRSF1-206ENST00000583741 BCO2Q9BYV7 579 aa22.48■■□□□ 1.19
SRSF1-206ENST00000583741 TFIP11Q9UBB9 837 aaKnown RBP22.48■■□□□ 1.19
SRSF1-206ENST00000583741 NOL7Q9UMY1 257 aaKnown RBP22.48■■□□□ 1.19
SRSF1-206ENST00000583741 TMEM189-UBE2V1I3L0A0 370 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 CYP11B2P19099 503 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 NAMPTP43490 491 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 CLCNKBP51801 687 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 SLC5A9Q2M3M2 681 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 UVSSAQ2YD98 709 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 C3orf58Q8NDZ4 430 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 POLR3CQ9BUI4 534 aaPredicted RBP22.47■■□□□ 1.19
SRSF1-206ENST00000583741 SCAND2PQ9GZW5 306 aaPredicted RBP22.47■■□□□ 1.19
SRSF1-206ENST00000583741 GOLGA2P5Q9HBQ8 144 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms