RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 IFIT1BQ5T764 474 aaKnown RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 PDE12Q6L8Q7 609 aaKnown RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 TAF2Q6P1X5 1199 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 XRRA1Q6P2D8 792 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 TSSK4Q6SA08 328 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 KCNT2Q6UVM3 1135 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 TMTC3Q6ZXV5 915 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 LYSMD3Q7Z3D4 306 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 TMC6Q7Z403 805 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 TMEM173Q86WV6 379 aaPredicted RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 MCF2L2Q86YR7 1114 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 VSTM4Q8IW00 320 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 ENAHQ8N8S7 591 aaPredicted RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 MRPL43Q8N983 215 aaKnown RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 KDF1Q8NAX2 398 aaPredicted RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 KIF18AQ8NI77 898 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 TMEM40Q8WWA1 233 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 C16orf45Q96MC5 204 aaPredicted RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 PPP1R16BQ96T49 567 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 ADAM2Q99965 735 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 RTKNQ9BST9 563 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 MYL10Q9BUA6 226 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 NGRNQ9NPE2 291 aaKnown RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 SH3GLB2Q9NR46 395 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 CGNQ9P2M7 1197 aaKnown RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 DNMT3LQ9UJW3 386 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 ZNF215Q9UL58 517 aaPredicted RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 LZTS1Q9Y250 596 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 MRPL11Q9Y3B7 192 aaKnown RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 NOC2LQ9Y3T9 749 aaKnown RBP8.17□□□□□ -1.1
NF1-222ENST00000582892 PCDHB7Q9Y5E2 793 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 PCDHA5Q9Y5H7 936 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 TRPV2Q9Y5S1 764 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 IGSF9BQ9UPX0 1349 aa8.17□□□□□ -1.1
NF1-222ENST00000582892 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.16□□□□□ -1.1
NF1-222ENST00000582892 FIGNL2A6NMB9 653 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 C9IYK1 514 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 PIK3CDO00329 1044 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 TGFB3P10600 412 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 LAG3P18627 525 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 KIF5BP33176 963 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 TCF7P36402 384 aaPredicted RBP8.16□□□□□ -1.1
NF1-222ENST00000582892 UBASH3AP57075 661 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 LMNB2Q03252 620 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 PNOCQ13519 176 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 NCOA4Q13772 614 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 ATAT1Q5SQI0 421 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 ARMCX5Q6P1M9 558 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 KCNV1Q6PIU1 500 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 FILIP1Q7Z7B0 1213 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 RSPH3Q86UC2 560 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 STAG2Q8N3U4 1231 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 RNF217Q8TC41 542 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 BCL7CQ8WUZ0 217 aaPredicted RBP8.16□□□□□ -1.1
NF1-222ENST00000582892 TNFRSF25Q93038 417 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 SMARCE1Q969G3 411 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 ZNF775Q96BV0 537 aaPredicted RBP8.16□□□□□ -1.1
NF1-222ENST00000582892 CASD1Q96PB1 797 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 GSDMAQ96QA5 445 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 FTHL17Q9BXU8 183 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 L2HGDHQ9H9P8 463 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 TCP11L1Q9NUJ3 509 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 PNMA2Q9UL42 364 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 GINS2Q9Y248 185 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 SIT1Q9Y3P8 196 aa8.16□□□□□ -1.1
NF1-222ENST00000582892 MTF2Q9Y483 593 aaPredicted RBP8.16□□□□□ -1.1
NF1-222ENST00000582892 PHLPP2Q6ZVD8 1323 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 CNTNAP5Q8WYK1 1306 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 GSTTP1A0A1W2PQM5 241 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 PRR5-ARHGAP8B1AHC4 643 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 SPATA31C2B4DYI2 1134 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 BIN1O00499 593 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 TERTO14746 1132 aaKnown RBP8.15□□□□□ -1.1
NF1-222ENST00000582892 ARHGAP6O43182 974 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 ZSCAN12O43309 604 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 ATP9AO75110 1047 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 SLFN14P0C7P3 912 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 INSRRP14616 1297 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 GNAQP50148 359 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 ARHGAP8P85298 464 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 GHRHRQ02643 423 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 CSTF1Q05048 431 aaKnown RBP8.15□□□□□ -1.1
NF1-222ENST00000582892 SPEM2Q0P670 501 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 TBX2Q13207 712 aaPredicted RBP8.15□□□□□ -1.1
NF1-222ENST00000582892 SMC1AQ14683 1233 aaKnown RBP8.15□□□□□ -1.1
NF1-222ENST00000582892 GPATCH4Q5T3I0 446 aaKnown RBP8.15□□□□□ -1.1
NF1-222ENST00000582892 E4F1Q66K89 784 aaPredicted RBP8.15□□□□□ -1.1
NF1-222ENST00000582892 ARL6IP4Q66PJ3 421 aaKnown RBP8.15□□□□□ -1.1
NF1-222ENST00000582892 GALNT17Q6IS24 598 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 CCDC149Q6ZUS6 474 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 DGKHQ86XP1 1220 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 SLC44A3Q8N4M1 653 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 PJA1Q8NG27 643 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 CTCFLQ8NI51 663 aaPredicted RBP8.15□□□□□ -1.1
NF1-222ENST00000582892 SLC22A17Q8WUG5 538 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 ACSF2Q96CM8 615 aaPredicted RBP8.15□□□□□ -1.1
NF1-222ENST00000582892 ZNF558Q96NG5 402 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 CLIC6Q96NY7 704 aa8.15□□□□□ -1.1
NF1-222ENST00000582892 INPP4AQ96PE3 977 aaPredicted RBP8.15□□□□□ -1.1
NF1-222ENST00000582892 MYADMQ96S97 322 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms