RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 NACC1Q96RE7 527 aa14.95□□□□□ -0.02
SS18-222ENST00000582792 CCDC113Q9H0I3 377 aa14.95□□□□□ -0.02
SS18-222ENST00000582792 DAXXQ9UER7 740 aaPredicted RBP14.95□□□□□ -0.02
SS18-222ENST00000582792 USP20Q9Y2K6 914 aa14.95□□□□□ -0.02
SS18-222ENST00000582792 PCDHGA2Q9Y5H1 932 aa14.95□□□□□ -0.02
SS18-222ENST00000582792 MED24O75448 989 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 B3GAT3O94766 335 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 EDN1P05305 212 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 CD72P21854 359 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 NAMPTP43490 491 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 CSTF1Q05048 431 aaKnown RBP14.94□□□□□ -0.02
SS18-222ENST00000582792 DCAF4L1Q3SXM0 396 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 VARS2Q5ST30 1063 aaKnown RBP14.94□□□□□ -0.02
SS18-222ENST00000582792 ZBTB41Q5SVQ8 909 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 EEF1DP3Q658K8 133 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 TPRG1Q6ZUI0 275 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 DIS3L2Q8IYB7 885 aaKnown RBP14.94□□□□□ -0.02
SS18-222ENST00000582792 ZBTB44Q8NCP5 570 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 DEPTORQ8TB45 409 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 ING5Q8WYH8 240 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 CLDN23Q96B33 292 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 PPP1R10Q96QC0 940 aaKnown RBP14.94□□□□□ -0.02
SS18-222ENST00000582792 NELL2Q99435 816 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 POLR3CQ9BUI4 534 aaPredicted RBP14.94□□□□□ -0.02
SS18-222ENST00000582792 TMEM60Q9H2L4 133 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 GDE1Q9NZC3 331 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 NCDNQ9UBB6 729 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 GDAQ9Y2T3 454 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 MRPS23Q9Y3D9 190 aaKnown RBP14.94□□□□□ -0.02
SS18-222ENST00000582792 BACE2Q9Y5Z0 518 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 CDY1Q9Y6F8 540 aa14.94□□□□□ -0.02
SS18-222ENST00000582792 ECI2O75521 394 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 RHOP08100 348 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 CYP11B2P19099 503 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 IGFBP6P24592 240 aaPredicted RBP14.93□□□□□ -0.02
SS18-222ENST00000582792 TARSP26639 723 aaKnown RBP14.93□□□□□ -0.02
SS18-222ENST00000582792 TKTP29401 623 aaKnown RBP14.93□□□□□ -0.02
SS18-222ENST00000582792 RPS9P46781 194 aaKnown RBP14.93□□□□□ -0.02
SS18-222ENST00000582792 CLCNKBP51801 687 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 UPP1Q16831 310 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 RSPO4Q2I0M5 234 aaPredicted RBP14.93□□□□□ -0.02
SS18-222ENST00000582792 PADI6Q6TGC4 694 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 CD300LGQ6UXG3 332 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 ANKS3Q6ZW76 656 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 ATRIPQ8WXE1 791 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 NELL1Q92832 810 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 DDX27Q96GQ7 796 aaKnown RBP14.93□□□□□ -0.02
SS18-222ENST00000582792 UROC1Q96N76 676 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 AVENQ9NQS1 362 aaPredicted RBP14.93□□□□□ -0.02
SS18-222ENST00000582792 ZSCAN32Q9NX65 697 aa14.93□□□□□ -0.02
SS18-222ENST00000582792 ARHGEF35A5YM69 484 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 NCAM2O15394 837 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 TRAPPC3O43617 180 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 LILRB5O75023 590 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 LIG1P18858 919 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 PPP2R5AQ15172 486 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 SLC5A9Q2M3M2 681 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 GLRA4Q5JXX5 417 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 ZNF852Q6ZMS4 543 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 GPR161Q8N6U8 529 aaKnown RBP14.92□□□□□ -0.02
SS18-222ENST00000582792 NECAB1Q8N987 351 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 C3orf58Q8NDZ4 430 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 GTF3C6Q969F1 213 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 MCRS1Q96EZ8 462 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 PLA2G2FQ9BZM2 168 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 EPC1Q9H2F5 836 aa14.92□□□□□ -0.02
SS18-222ENST00000582792 EPG5Q9HCE0 2579 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 ARHGEF37A1IGU5 675 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 LARGE1O95461 756 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 CEBPBP17676 345 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 RPA1P27694 616 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 MCM7P33993 719 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 MCM2P49736 904 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 EFNA5P52803 228 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 FZD5Q13467 585 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 TRIM29Q14134 588 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 ME3Q16798 604 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 NT5DC1Q5TFE4 455 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 ATF7IP2Q5U623 682 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 TANGO2Q6ICL3 276 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 SLC8B1Q6J4K2 584 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 POTEHQ6S545 545 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 NSUN7Q8NE18 718 aaKnown RBP14.91□□□□□ -0.02
SS18-222ENST00000582792 ZNF461Q8TAF7 563 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 ELSPBP1Q96BH3 223 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 ZSCAN31Q96LW9 406 aaPredicted RBP14.91□□□□□ -0.02
SS18-222ENST00000582792 KIFC3Q9BVG8 833 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 GOLGA2P5Q9HBQ8 144 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 PRMT8Q9NR22 394 aaPredicted RBP14.91□□□□□ -0.02
SS18-222ENST00000582792 HEBP1Q9NRV9 189 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 LIMCH1Q9UPQ0 1083 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 SMG5Q9UPR3 1016 aaKnown RBP14.91□□□□□ -0.02
SS18-222ENST00000582792 MRPS17Q9Y2R5 130 aaKnown RBP14.91□□□□□ -0.02
SS18-222ENST00000582792 TRIP11Q15643 1979 aa14.91□□□□□ -0.02
SS18-222ENST00000582792 SHISA7A6NL88 538 aa14.9□□□□□ -0.02
SS18-222ENST00000582792 I3L4J1 428 aa14.9□□□□□ -0.02
SS18-222ENST00000582792 LRG1P02750 347 aa14.9□□□□□ -0.02
SS18-222ENST00000582792 PTPN2P17706 415 aa14.9□□□□□ -0.02
SS18-222ENST00000582792 SDHBP21912 280 aa14.9□□□□□ -0.02
SS18-222ENST00000582792 BRCC3P46736 316 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms