RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 NR1H3Q13133 447 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 MAP2K5Q13163 448 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 TMEM132DQ14C87 1099 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 EFCAB12Q6NXP0 572 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 RHOXF2Q9BQY4 288 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 PLCD4Q9BRC7 762 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 PARD6BQ9BYG5 372 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 SNX25Q9H3E2 840 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 GOLGA6AQ9NYA3 693 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 B4GALT4O60513 344 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 CELF2O95319 508 aaKnown RBP10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 STAU1O95793 577 aaKnown RBP10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 FTLP02792 175 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 H2AFXP16104 143 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 LAMTOR4Q0VGL1 99 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 PLA2G4FQ68DD2 849 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 TTC25Q96NG3 672 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 WDR24Q96S15 920 aa10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 CNOT10Q9H9A5 744 aaKnown RBP10.81□□□□□ -0.68
TRAPPC8-211ENST00000582539 TNPO2O14787 897 aaKnown RBP10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 VDRP11473 427 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 NOP14P78316 857 aaKnown RBP10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 KCNMA1Q12791 1236 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 MAMDC4Q6UXC1 1216 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 CCDC50Q8IVM0 306 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 SMIM35A0A1B0GVV1 85 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 AP3B1O00203 1094 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 ECEL1O95672 775 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 WEE2P0C1S8 567 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 CYP2C19P33261 490 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 PHBP35232 272 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 PTENP60484 403 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 TFAMQ00059 246 aaKnown RBP10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 CYP27A1Q02318 531 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 MAPK7Q13164 816 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 SPRYD7Q5W111 196 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 CDCA2Q69YH5 1023 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 CC2D1AQ6P1N0 951 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 UNC93AQ86WB7 457 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 RHPN2Q8IUC4 686 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 CCDC60Q8IWA6 550 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 SPATA4Q8NEY3 305 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 IL31RAQ8NI17 732 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 GPR20Q99678 358 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 TMEM117Q9H0C3 514 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 COL20A1Q9P218 1284 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 CCNE2O96020 404 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 TRIM49P0CI25 452 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 TRIM49CP0CI26 452 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 HARSP12081 509 aaKnown RBP10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 AKR1A1P14550 325 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 PTP4A2Q12974 167 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 ZACNQ401N2 412 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 WDR59Q6PJI9 974 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 TSHZ1Q6ZSZ6 1077 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 ANO5Q75V66 913 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 C7orf31Q8N865 590 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 TINF2Q9BSI4 451 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 PHACTR1Q9C0D0 580 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 RRN3Q9NYV6 651 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 MYH7BA7E2Y1 1941 aa10.8□□□□□ -0.68
TRAPPC8-211ENST00000582539 SGO2Q562F6 1265 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 USP38Q8NB14 1042 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 EXOC4Q96A65 974 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 NLRP4Q96MN2 994 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 MTG1Q9BT17 334 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 A0A0B4J269 797 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 HMGB1P1B2RPK0 211 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 KRT19P08727 400 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 SRGAP2CP0DJJ0 459 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 EIF4BP23588 611 aaKnown RBP10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 HUNKP57058 714 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 MCCD1P59942 119 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 JAG1P78504 1218 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 CLEC16AQ2KHT3 1053 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 PRPF31Q8WWY3 499 aaKnown RBP10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 DDX27Q96GQ7 796 aaKnown RBP10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 ISCUQ9H1K1 167 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 CHST12Q9NRB3 414 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 DSEQ9UL01 958 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 GSTTP1A0A1W2PQM5 241 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 BUB1O43683 1085 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 KIAA0754O94854 1291 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 ADORA2AP29274 412 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 ZNF157P51786 506 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 ACVR2BQ13705 512 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 MAPRE1Q15691 268 aaKnown RBP10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 KIAA1755Q5JYT7 1200 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 LGSNQ5TDP6 509 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 SND1Q7KZF4 910 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 RBBP8NLQ8NC74 664 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 NLGN2Q8NFZ4 835 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 C17orf102A2RUQ5 167 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 PHF2O75151 1096 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 GLRA2P23416 452 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 PLCB4Q15147 1175 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 FAM47CQ5HY64 1035 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 ACBD5Q5T8D3 534 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 CCDC105Q8IYK2 499 aa10.79□□□□□ -0.68
TRAPPC8-211ENST00000582539 MED15Q96RN5 788 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms