RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 GATMP50440 423 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 FANCCQ00597 558 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 KCNH2Q12809 1159 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 MAN2A1Q16706 1144 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 UVSSAQ2YD98 709 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 VWA3BQ502W6 1294 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 DCAF17Q5H9S7 520 aaPredicted RBP10.33□□□□□ -0.76
RFFL-210ENST00000582308 GLRA4Q5JXX5 417 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 TCERG1LQ5VWI1 586 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 SCARA3Q6AZY7 606 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 TMCO2Q7Z6W1 182 aaPredicted RBP10.33□□□□□ -0.76
RFFL-210ENST00000582308 CD302Q8IX05 232 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 OR5B17Q8NGF7 314 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 HELQQ8TDG4 1101 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 TOP1MTQ969P6 601 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 C18orf25Q96B23 403 aaPredicted RBP10.33□□□□□ -0.76
RFFL-210ENST00000582308 PPP1R10Q96QC0 940 aaKnown RBP10.33□□□□□ -0.76
RFFL-210ENST00000582308 FNBP1Q96RU3 617 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 CGRRF1Q99675 332 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 VPS16Q9H269 839 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 UBN1Q9NPG3 1134 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 INTS13Q9NVM9 706 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 LRFN2Q9ULH4 789 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 KIAA1671Q9BY89 1806 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 ZBBXA8MT70 800 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 AMHP03971 560 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 C4BPAP04003 597 aaKnown RBP10.32□□□□□ -0.76
RFFL-210ENST00000582308 PRKCSHP14314 528 aaPredicted RBP10.32□□□□□ -0.76
RFFL-210ENST00000582308 TNNI1P19237 187 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 KCNJ6P48051 423 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 GCLMP48507 274 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 FMO5P49326 533 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 SCNN1GP51170 649 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 GUCY2FP51841 1108 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 TFAMQ00059 246 aaKnown RBP10.32□□□□□ -0.76
RFFL-210ENST00000582308 TMEM132DQ14C87 1099 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 NAB2Q15742 525 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 DUOXA2Q1HG44 320 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 CBWD6Q4V339 395 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 NOMO2Q5JPE7 1267 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 CBWD3Q5JTY5 395 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 CBWD5Q5RIA9 395 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 C9orf50Q5SZB4 431 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 RASIP1Q5U651 963 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 GLB1LQ6UWU2 654 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 C15orf39Q6ZRI6 1047 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 SV2AQ7L0J3 742 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 USP37Q86T82 979 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 WDR49Q8IV35 697 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 ANKRD20A12PQ8NF67 263 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 KIF12Q96FN5 646 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 CASD1Q96PB1 797 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 TSPAN18Q96SJ8 248 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 MTMR12Q9C0I1 747 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 NDST4Q9H3R1 872 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 MMRN2Q9H8L6 949 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 RNF216Q9NWF9 866 aaPredicted RBP10.32□□□□□ -0.76
RFFL-210ENST00000582308 INPP5FQ9Y2H2 1132 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 DERAQ9Y315 318 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 C2CD2Q9Y426 696 aa10.32□□□□□ -0.76
RFFL-210ENST00000582308 A0A1B0GTH6 734 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 GOLGA6L3A6NEY3 463 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 LGALS16A8MUM7 142 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 TEX33O43247 280 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 STX10O60499 249 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 DGKIO75912 1065 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 VNN1O95497 513 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 SERPINC1P01008 464 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 POMCP01189 267 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 AFPP02771 609 aaKnown RBP10.31□□□□□ -0.76
RFFL-210ENST00000582308 THP07101 528 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 GTF2H1P32780 548 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 UBASH3AP57075 661 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 SOX4Q06945 474 aaPredicted RBP10.31□□□□□ -0.76
RFFL-210ENST00000582308 GSE1Q14687 1217 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 NR1I3Q14994 352 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 SHHQ15465 462 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 ZACNQ401N2 412 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 TDRD10Q5VZ19 366 aaKnown RBP10.31□□□□□ -0.76
RFFL-210ENST00000582308 FAM117BQ6P1L5 589 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 SARM1Q6SZW1 724 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 TRAPPC11Q7Z392 1133 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 NT5DC4Q86YG4 428 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 RPS6KC1Q96S38 1066 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 GDF15Q99988 308 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 TMEM117Q9H0C3 514 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 GRPEL1Q9HAV7 217 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 TMEM8AQ9HCN3 771 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
RFFL-210ENST00000582308 DPP3Q9NY33 737 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 IFNKQ9P0W0 207 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 TUBGCP4Q9UGJ1 667 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 SLC4A7Q9Y6M7 1214 aa10.31□□□□□ -0.76
RFFL-210ENST00000582308 NLRC5Q86WI3 1866 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 TBKBP1A7MCY6 615 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 PES1O00541 588 aaKnown RBP10.3□□□□□ -0.76
RFFL-210ENST00000582308 PMM2O15305 246 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 HOXA2O43364 376 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 B4GALT3O60512 393 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 LRRN2O75325 713 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms