RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 RTL10Q7L3V2 364 aa24.46■■□□□ 1.51
CASC3-207ENST00000581849 CEP57Q86XR8 500 aa24.46■■□□□ 1.51
CASC3-207ENST00000581849 IGSF9Q9P2J2 1179 aa24.46■■□□□ 1.51
CASC3-207ENST00000581849 VPS37CA5D8V6 355 aaPredicted RBP24.45■■□□□ 1.5
CASC3-207ENST00000581849 ASGR2P07307 311 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 POU2F2P09086 479 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 HNRNPA1P09651 372 aaKnown RBP eCLIP24.45■■□□□ 1.5
CASC3-207ENST00000581849 SPATA31D3P0C874 917 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 NUBP1P53384 320 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 RAB33AQ14088 237 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 CD300LGQ6UXG3 332 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 SPATA31D4Q6ZUB0 917 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 GLYCTKQ8IVS8 523 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 INTS4Q96HW7 963 aaKnown RBP24.45■■□□□ 1.5
CASC3-207ENST00000581849 CCSER1Q9C0I3 900 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 PIDD1Q9HB75 910 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 EPS15L1Q9UBC2 864 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 MTRRQ9UBK8 725 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 BACE2Q9Y5Z0 518 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 PIEZO1Q92508 2521 aa24.45■■□□□ 1.5
CASC3-207ENST00000581849 RPL9P32969 192 aaKnown RBP24.44■■□□□ 1.5
CASC3-207ENST00000581849 ABCD1P33897 745 aa24.44■■□□□ 1.5
CASC3-207ENST00000581849 ZNF131P52739 623 aa24.44■■□□□ 1.5
CASC3-207ENST00000581849 OSTNP61366 133 aa24.44■■□□□ 1.5
CASC3-207ENST00000581849 MCL1Q07820 350 aa24.44■■□□□ 1.5
CASC3-207ENST00000581849 LIN9Q5TKA1 542 aa24.44■■□□□ 1.5
CASC3-207ENST00000581849 ANKS3Q6ZW76 656 aa24.44■■□□□ 1.5
CASC3-207ENST00000581849 GPBP1Q86WP2 473 aa24.44■■□□□ 1.5
CASC3-207ENST00000581849 NXPE3Q969Y0 559 aa24.44■■□□□ 1.5
CASC3-207ENST00000581849 REEP2Q9BRK0 252 aa24.44■■□□□ 1.5
CASC3-207ENST00000581849 BLOC1S4Q9NUP1 217 aa24.44■■□□□ 1.5
CASC3-207ENST00000581849 PDCD11Q14690 1871 aaKnown RBP24.43■■□□□ 1.5
CASC3-207ENST00000581849 DOCK8Q8NF50 2099 aa24.43■■□□□ 1.5
CASC3-207ENST00000581849 CLDN3O15551 220 aa24.43■■□□□ 1.5
CASC3-207ENST00000581849 SOX4Q06945 474 aaPredicted RBP24.43■■□□□ 1.5
CASC3-207ENST00000581849 TDGQ13569 410 aa24.43■■□□□ 1.5
CASC3-207ENST00000581849 KYAT1Q16773 422 aa24.43■■□□□ 1.5
CASC3-207ENST00000581849 HAUS6Q7Z4H7 955 aa24.43■■□□□ 1.5
CASC3-207ENST00000581849 RAD54LQ92698 747 aa24.43■■□□□ 1.5
CASC3-207ENST00000581849 ZMAT2Q96NC0 199 aaKnown RBP24.43■■□□□ 1.5
CASC3-207ENST00000581849 BACH2Q9BYV9 841 aa24.43■■□□□ 1.5
CASC3-207ENST00000581849 PLEKHA5Q9HAU0 1116 aa24.43■■□□□ 1.5
CASC3-207ENST00000581849 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.43■■□□□ 1.5
CASC3-207ENST00000581849 ANKFY1Q9P2R3 1169 aa24.43■■□□□ 1.5
CASC3-207ENST00000581849 PODXLO00592 558 aa24.42■■□□□ 1.5
CASC3-207ENST00000581849 PIGRP01833 764 aa24.42■■□□□ 1.5
CASC3-207ENST00000581849 PLCG1P19174 1290 aa24.42■■□□□ 1.5
CASC3-207ENST00000581849 NHLH1Q02575 133 aa24.42■■□□□ 1.5
CASC3-207ENST00000581849 UVSSAQ2YD98 709 aa24.42■■□□□ 1.5
CASC3-207ENST00000581849 C3orf58Q8NDZ4 430 aa24.42■■□□□ 1.5
CASC3-207ENST00000581849 RASSF8Q8NHQ8 419 aa24.42■■□□□ 1.5
CASC3-207ENST00000581849 ZBTB45Q96K62 511 aaPredicted RBP24.42■■□□□ 1.5
CASC3-207ENST00000581849 KCNK12Q9HB15 430 aa24.42■■□□□ 1.5
CASC3-207ENST00000581849 PARVGQ9HBI0 331 aa24.42■■□□□ 1.5
CASC3-207ENST00000581849 GOLGA2P5Q9HBQ8 144 aa24.42■■□□□ 1.5
CASC3-207ENST00000581849 DUSP12Q9UNI6 340 aa24.42■■□□□ 1.5
CASC3-207ENST00000581849 ZFP37Q9Y6Q3 630 aaPredicted RBP24.42■■□□□ 1.5
CASC3-207ENST00000581849 MORC2Q9Y6X9 1032 aaPredicted RBP24.42■■□□□ 1.5
CASC3-207ENST00000581849 NPHP3-ACAD11A0A0J9YXS1 232 aa24.41■■□□□ 1.5
CASC3-207ENST00000581849 SYN3O14994 580 aa24.41■■□□□ 1.5
CASC3-207ENST00000581849 N4BP1O75113 896 aaKnown RBP24.41■■□□□ 1.5
CASC3-207ENST00000581849 FAM13AO94988 1023 aa24.41■■□□□ 1.5
CASC3-207ENST00000581849 AVPR2P30518 371 aa24.41■■□□□ 1.5
CASC3-207ENST00000581849 GBP2P32456 591 aaPredicted RBP24.41■■□□□ 1.5
CASC3-207ENST00000581849 GRIN1Q05586 938 aa24.41■■□□□ 1.5
CASC3-207ENST00000581849 KARSQ15046 597 aaKnown RBP24.41■■□□□ 1.5
CASC3-207ENST00000581849 PTPAQ15257 358 aa24.41■■□□□ 1.5
CASC3-207ENST00000581849 LRRC15Q8TF66 581 aa24.41■■□□□ 1.5
CASC3-207ENST00000581849 C8AP07357 584 aa24.4■■□□□ 1.5
CASC3-207ENST00000581849 CLTAP09496 248 aa24.4■■□□□ 1.5
CASC3-207ENST00000581849 MYBP10242 640 aa24.4■■□□□ 1.5
CASC3-207ENST00000581849 HARSP12081 509 aaKnown RBP24.4■■□□□ 1.5
CASC3-207ENST00000581849 SYT1P21579 422 aa24.4■■□□□ 1.5
CASC3-207ENST00000581849 PTPN5P54829 565 aa24.4■■□□□ 1.5
CASC3-207ENST00000581849 CACNB1Q02641 598 aaPredicted RBP24.4■■□□□ 1.5
CASC3-207ENST00000581849 SLC10A6Q3KNW5 377 aa24.4■■□□□ 1.5
CASC3-207ENST00000581849 PPM1LQ5SGD2 360 aa24.4■■□□□ 1.5
CASC3-207ENST00000581849 LARP4BQ92615 738 aaKnown RBP24.4■■□□□ 1.5
CASC3-207ENST00000581849 TSPAN18Q96SJ8 248 aa24.4■■□□□ 1.5
CASC3-207ENST00000581849 MEFVO15553 781 aaPredicted RBP24.39■■□□□ 1.49
CASC3-207ENST00000581849 ADAM12O43184 909 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 TRAK2O60296 914 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 XYLBO75191 536 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 IGFBP6P24592 240 aaPredicted RBP24.39■■□□□ 1.49
CASC3-207ENST00000581849 TKTP29401 623 aaKnown RBP24.39■■□□□ 1.49
CASC3-207ENST00000581849 OR1D2P34982 312 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 RESTQ13127 1097 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 MCM6Q14566 821 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 SLC8B1Q6J4K2 584 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 MYCT1Q8N699 235 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 PRSS33Q8NF86 280 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 BICD1Q96G01 975 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 MYADMQ96S97 322 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 SMOC2Q9H3U7 446 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 STK17AQ9UEE5 414 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 TBX20Q9UMR3 447 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 CDY1Q9Y6F8 540 aa24.39■■□□□ 1.49
CASC3-207ENST00000581849 K7ENM7 598 aa24.38■■□□□ 1.49
CASC3-207ENST00000581849 TBCAO75347 108 aaKnown RBP24.38■■□□□ 1.49
CASC3-207ENST00000581849 KRT18P05783 430 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms