RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 AXLP30530 894 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 PSMC5P62195 406 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 SATB1Q01826 763 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 GRM2Q14416 872 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 HSP90AA2PQ14568 343 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-210ENST00000580713 FAM171A1Q5VUB5 890 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 HEATR6Q6AI08 1181 aaKnown RBP11.91□□□□□ -0.5
TOP3A-210ENST00000580713 TANGO2Q6ICL3 276 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 CCDC83Q8IWF9 413 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 EXOC8Q8IYI6 725 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 NECAB1Q8N987 351 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 PIK3R5Q8WYR1 880 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 FAM3CQ92520 227 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 DNASE1L2Q92874 299 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 GTF3C6Q969F1 213 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 CCDC51Q96ER9 411 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 CEP170P1Q96L14 293 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 CSRNP2Q9H175 543 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 GDE1Q9NZC3 331 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 KLK14Q9P0G3 267 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 CACNG4Q9UBN1 327 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 PARP2Q9UGN5 583 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 INO80B-WBP1J3KQ70 363 aa11.9□□□□□ -0.5
TOP3A-210ENST00000580713 SNPHO15079 494 aa11.9□□□□□ -0.5
TOP3A-210ENST00000580713 ASAP2O43150 1006 aa11.9□□□□□ -0.5
TOP3A-210ENST00000580713 ADAM12O43184 909 aa11.9□□□□□ -0.5
TOP3A-210ENST00000580713 TSPAN1O60635 241 aa11.9□□□□□ -0.5
TOP3A-210ENST00000580713 ADD1P35611 737 aaKnown RBP11.9□□□□□ -0.5
TOP3A-210ENST00000580713 USP11P51784 963 aa11.9□□□□□ -0.5
TOP3A-210ENST00000580713 AKAP17AQ02040 695 aaKnown RBP11.9□□□□□ -0.5
TOP3A-210ENST00000580713 GRIK3Q13003 919 aa11.9□□□□□ -0.5
TOP3A-210ENST00000580713 SF3A2Q15428 464 aaKnown RBP11.9□□□□□ -0.5
TOP3A-210ENST00000580713 PLPP6Q8IY26 295 aa11.9□□□□□ -0.5
TOP3A-210ENST00000580713 LNX1Q8TBB1 728 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-210ENST00000580713 TCP11Q8WWU5 503 aa11.9□□□□□ -0.5
TOP3A-210ENST00000580713 ELSPBP1Q96BH3 223 aa11.9□□□□□ -0.5
TOP3A-210ENST00000580713 INTS4Q96HW7 963 aaKnown RBP11.9□□□□□ -0.5
TOP3A-210ENST00000580713 NXF3Q9H4D5 531 aaKnown RBP11.9□□□□□ -0.5
TOP3A-210ENST00000580713 ZMIZ1Q9ULJ6 1067 aa11.9□□□□□ -0.5
TOP3A-210ENST00000580713 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-210ENST00000580713 FASNP49327 2511 aaKnown RBP11.9□□□□□ -0.5
TOP3A-210ENST00000580713 SDK1Q7Z5N4 2213 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 CASTOR2A6NHX0 329 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 SHISA7A6NL88 538 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 AXIN1O15169 862 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 DKC1O60832 514 aaKnown RBP eCLIP11.89□□□□□ -0.51
TOP3A-210ENST00000580713 RHOP08100 348 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 CEBPBP17676 345 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 CNR2P34972 360 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 OR1D2P34982 312 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 RCAN1P53805 252 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 CCT2P78371 535 aaKnown RBP11.89□□□□□ -0.51
TOP3A-210ENST00000580713 ST3GAL1Q11201 340 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 SCRN1Q12765 414 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 CCDC6Q16204 474 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 UVSSAQ2YD98 709 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 PDXDC1Q6P996 788 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 FAM160A2Q8N612 972 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-210ENST00000580713 PAAF1Q9BRP4 392 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 TRMT61BQ9BVS5 477 aaKnown RBP11.89□□□□□ -0.51
TOP3A-210ENST00000580713 ZFP14Q9HCL3 533 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 PIAS3Q9Y6X2 628 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 CEP295Q9C0D2 2601 aa11.89□□□□□ -0.51
TOP3A-210ENST00000580713 TDRD15B5MCY1 1934 aaKnown RBP11.88□□□□□ -0.51
TOP3A-210ENST00000580713 CCDC196A0A1B0GTZ2 297 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 C1QTNF9BB2RNN3 333 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 EDIL3O43854 480 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 NPTXRO95502 500 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 POU2F2P09086 479 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 C1QTNF9P0C862 333 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 GDI1P31150 447 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 RFC5P40937 340 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 QARSP47897 775 aaKnown RBP11.88□□□□□ -0.51
TOP3A-210ENST00000580713 LIMK1P53667 647 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 SLC5A9Q2M3M2 681 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 Q4G0T1 1027 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 UNQ6494/PRO21346Q6UXR6 183 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 LONP2Q86WA8 852 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 CDR2LQ86X02 465 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-210ENST00000580713 ZNF687Q8N1G0 1237 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 GSTCDQ8NEC7 633 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 CCDC148Q8NFR7 591 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 TBCKQ8TEA7 893 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 IRF7Q92985 503 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 ARRDC1-AS1Q9H2J1 176 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 DHX33Q9H6R0 707 aaKnown RBP11.88□□□□□ -0.51
TOP3A-210ENST00000580713 NCOA5Q9HCD5 579 aaKnown RBP11.88□□□□□ -0.51
TOP3A-210ENST00000580713 SMC3Q9UQE7 1217 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 NID2Q14112 1375 aa11.88□□□□□ -0.51
TOP3A-210ENST00000580713 ANKRD11Q6UB99 2663 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-210ENST00000580713 KIF4AO95239 1232 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 TDP2O95551 362 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 LRG1P02750 347 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 CHRNB1P11230 501 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 PTPN2P17706 415 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 CCNE1P24864 410 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 NLRP5P59047 1200 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 ELAVL2Q12926 359 aaKnown RBP11.87□□□□□ -0.51
TOP3A-210ENST00000580713 TUSC3Q13454 348 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms