RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 A0A087X0B3 334 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 MYMKA6NI61 221 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 ABLIM1O14639 778 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 GALR2O43603 387 aaPredicted RBP27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 SOD2P04179 222 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 GAP43P17677 238 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 LIG4P49917 911 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 TMC5Q6UXY8 1006 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 PPFIBP1Q86W92 1011 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 PLCD3Q8N3E9 789 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 CEP120Q8N960 986 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 FEZF2Q8TBJ5 459 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 ZBTB45Q96K62 511 aaPredicted RBP27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 HERC2P3Q9BVR0 1158 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 LRRC27Q9C0I9 530 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 CUEDC2Q9H467 287 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 MRPL17Q9NRX2 175 aaKnown RBP27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 SEL1LQ9UBV2 794 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 SSX2IPQ9Y2D8 614 aa27.16■■□□□ 1.94
CDC42EP4-205ENST00000580315 HNRNPDLO14979 420 aaKnown RBP27.15■■□□□ 1.94
CDC42EP4-205ENST00000580315 URODP06132 367 aa27.15■■□□□ 1.94
CDC42EP4-205ENST00000580315 MCL1Q07820 350 aa27.15■■□□□ 1.94
CDC42EP4-205ENST00000580315 HSP90AA2PQ14568 343 aaPredicted RBP27.15■■□□□ 1.94
CDC42EP4-205ENST00000580315 EMILIN2Q9BXX0 1053 aa27.15■■□□□ 1.94
CDC42EP4-205ENST00000580315 ADAM28Q9UKQ2 775 aa27.15■■□□□ 1.94
CDC42EP4-205ENST00000580315 ATP6V1DQ9Y5K8 247 aa27.15■■□□□ 1.94
CDC42EP4-205ENST00000580315 MYO15AQ9UKN7 3530 aa27.15■■□□□ 1.94
CDC42EP4-205ENST00000580315 CASTOR2A6NHX0 329 aa27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 TADA2AO75478 443 aa27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 NMT1P30419 496 aaKnown RBP27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 GTF2BQ00403 316 aa27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 AXDND1Q5T1B0 1012 aaPredicted RBP27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 SHC4Q6S5L8 630 aa27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 SFR1Q86XK3 245 aa27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 TMEM105Q8N8V8 129 aa27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 IQUBQ8NA54 791 aa27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 ST6GALNAC4Q9H4F1 302 aa27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 FAM13BQ9NYF5 915 aa27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 RCOR1Q9UKL0 485 aa27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 PCDHA7Q9UN72 937 aa27.14■■□□□ 1.94
CDC42EP4-205ENST00000580315 MYH15Q9Y2K3 1946 aa27.14■■□□□ 1.93
CDC42EP4-205ENST00000580315 PIGRP01833 764 aa27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 GLRA4Q5JXX5 417 aa27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 FUT10Q6P4F1 479 aa27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 GPR149Q86SP6 731 aa27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 DNAJC19Q96DA6 116 aa27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 KLHL5Q96PQ7 755 aa27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 PPP1R10Q96QC0 940 aaKnown RBP27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 FIZ1Q96SL8 496 aa27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 CXCL16Q9H2A7 254 aa27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 TNMDQ9H2S6 317 aa27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 SFXN1Q9H9B4 322 aa27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 SLC38A7Q9NVC3 462 aa27.13■■□□□ 1.93
CDC42EP4-205ENST00000580315 SMIM28A0A1B0GU29 152 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 F8W810 466 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 CNPP09543 421 aaKnown RBP27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 IDEP14735 1019 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 GLUD2P49448 558 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 CLCN4P51793 760 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 KRT85P78386 507 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 AMPD3Q01432 767 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 NAB2Q15742 525 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 KYAT1Q16773 422 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 MAP4K3Q8IVH8 894 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 RABGGTAQ92696 567 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 DHX58Q96C10 678 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 HVCN1Q96D96 273 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 SNX27Q96L92 541 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 UROC1Q96N76 676 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 MRPL44Q9H9J2 332 aaKnown RBP27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 ZDHHC9Q9Y397 364 aa27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 SF3B1O75533 1304 aaKnown RBP eCLIP27.12■■□□□ 1.93
CDC42EP4-205ENST00000580315 LILRB3O75022 631 aa27.11■■□□□ 1.93
CDC42EP4-205ENST00000580315 EFEMP2O95967 443 aa27.11■■□□□ 1.93
CDC42EP4-205ENST00000580315 KLRC2P26717 231 aa27.11■■□□□ 1.93
CDC42EP4-205ENST00000580315 E2F4Q16254 413 aa27.11■■□□□ 1.93
CDC42EP4-205ENST00000580315 USP41Q3LFD5 358 aa27.11■■□□□ 1.93
CDC42EP4-205ENST00000580315 XKR4Q5GH76 650 aa27.11■■□□□ 1.93
CDC42EP4-205ENST00000580315 ASTLQ6HA08 431 aaPredicted RBP27.11■■□□□ 1.93
CDC42EP4-205ENST00000580315 ALKAL1Q6UXT8 129 aa27.11■■□□□ 1.93
CDC42EP4-205ENST00000580315 ZNF720Q7Z2F6 126 aa27.11■■□□□ 1.93
CDC42EP4-205ENST00000580315 RNF168Q8IYW5 571 aaPredicted RBP27.11■■□□□ 1.93
CDC42EP4-205ENST00000580315 PAAF1Q9BRP4 392 aa27.11■■□□□ 1.93
CDC42EP4-205ENST00000580315 PROB1E7EW31 1015 aa27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 C2CD2LO14523 706 aa27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 CLTAP09496 248 aa27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 ZC2HC1CQ53FD0 456 aaPredicted RBP27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 TAS1R1Q7RTX1 841 aa27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 CCDC65Q8IXS2 484 aa27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 ACSF2Q96CM8 615 aaPredicted RBP27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 PYM1Q9BRP8 204 aaKnown RBP27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 MAGEF1Q9HAY2 307 aa27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 PANK4Q9NVE7 773 aa27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 CNTN3Q9P232 1028 aa27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 CACNG4Q9UBN1 327 aa27.1■■□□□ 1.93
CDC42EP4-205ENST00000580315 MYH11P35749 1972 aa27.09■■□□□ 1.93
CDC42EP4-205ENST00000580315 SPDYE4A6NLX3 237 aa27.09■■□□□ 1.93
CDC42EP4-205ENST00000580315 KCNE1P15382 129 aa27.09■■□□□ 1.93
CDC42EP4-205ENST00000580315 DSG1Q02413 1049 aa27.09■■□□□ 1.93
CDC42EP4-205ENST00000580315 ELAVL2Q12926 359 aaKnown RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms