RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PHKA2P46019 1235 aa13.7□□□□□ -0.22
CDK5RAP3-217ENST00000580287 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-217ENST00000580287 GDF6Q6KF10 455 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-217ENST00000580287 SPAG5Q96R06 1193 aa13.7□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TMEM117Q9H0C3 514 aa13.7□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ADAMTS10Q9H324 1103 aa13.7□□□□□ -0.22
CDK5RAP3-217ENST00000580287 SIX2Q9NPC8 291 aa13.7□□□□□ -0.22
CDK5RAP3-217ENST00000580287 RNF19AQ9NV58 838 aa13.7□□□□□ -0.22
CDK5RAP3-217ENST00000580287 FEZ2Q9UHY8 353 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ASAP2O43150 1006 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 EXTL3O43909 919 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 GPR32O75388 356 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 PIGRP01833 764 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ARF4P18085 180 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 DNA2P51530 1060 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 GBP6Q6ZN66 633 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 SEMA4DQ92854 862 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 MFSD14AQ96MC6 490 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 MTG1Q9BT17 334 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 C2orf40Q9H1Z8 148 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 GANQ9H2C0 597 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 RBAKQ9NYW8 714 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 DDX20Q9UHI6 824 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 CAPN6Q9Y6Q1 641 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 CCDC151A5D8V7 595 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TACC1O75410 805 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 UCHL3P15374 230 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 GRK4P32298 578 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 SNRPFP62306 86 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 MYL7Q01449 175 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 KLHL30Q0D2K2 578 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ZNF568Q3ZCX4 644 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 KLHDC7AQ5VTJ3 777 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TRAPPC11Q7Z392 1133 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 DNAAF5Q86Y56 855 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TMEM174Q8WUU8 243 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 PI4K2AQ9BTU6 479 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 OSBPL7Q9BZF2 842 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 EDEM3Q9BZQ6 932 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 PLEKHA4Q9H4M7 779 aa13.69□□□□□ -0.22
CDK5RAP3-217ENST00000580287 BUB1O43683 1085 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 FAM189A1O60320 539 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ASIC2Q16515 512 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 HGSNATQ68CP4 663 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 CCSAPQ6IQ19 270 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 PHLDB3Q6NSJ2 640 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ZPBP2Q6X784 338 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 KLHDC9Q8NEP7 349 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TAS1R2Q8TE23 839 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 KAT5Q92993 513 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 BEGAINQ9BUH8 593 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TSPYL1Q9H0U9 437 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 NUCKS1Q9H1E3 243 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 UPF3AQ9H1J1 476 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 PTPRHQ9HD43 1115 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 LAMA2P24043 3122 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 SERPING1P05155 500 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 CTSHP09668 335 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TNNI1P19237 187 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 LHX8Q68G74 356 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 SLFN12LQ6IEE8 588 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TSHZ1Q6ZSZ6 1077 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 SV2AQ7L0J3 742 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 OR5B17Q8NGF7 314 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 LMO3Q8TAP4 145 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 KATNAL1Q9BW62 490 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 SALL4Q9UJQ4 1053 aa13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TRIP12Q14669 1992 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-217ENST00000580287 KAT6AQ92794 2004 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 SMIM35A0A1B0GVV1 85 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 MTFR1Q15390 333 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 IQCEQ6IPM2 695 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ZNF662Q6ZS27 426 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TRIM58Q8NG06 486 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 PXYLP1Q8TE99 480 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ALS2CR12Q96Q35 445 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 INTS2Q9H0H0 1204 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 CDT1Q9H211 546 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 CXCL16Q9H2A7 254 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ADAMTS1Q9UHI8 967 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 NCK2O43639 380 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ZEB2O60315 1214 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TSPAN1O60635 241 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 MYBL2P10244 700 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 MXI1P50539 228 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 MCL1Q07820 350 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ARHGAP44Q17R89 818 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 MPZL3Q6UWV2 235 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ARHGEF19Q8IW93 802 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 KCNN1Q92952 543 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 PDZD7Q9H5P4 517 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 TRMT13Q9NUP7 481 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 PRMT7Q9NVM4 692 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 GTF2IRD1Q9UHL9 959 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 HES2Q9Y543 173 aa13.67□□□□□ -0.22
CDK5RAP3-217ENST00000580287 SSU72P8A0A1W2PR75 194 aa13.66□□□□□ -0.22
CDK5RAP3-217ENST00000580287 ERLIN2O94905 339 aa13.66□□□□□ -0.22
CDK5RAP3-217ENST00000580287 PROZP22891 400 aa13.66□□□□□ -0.22
CDK5RAP3-217ENST00000580287 C2orf54Q08AI8 447 aa13.66□□□□□ -0.22
CDK5RAP3-217ENST00000580287 MSANTD4Q8NCY6 345 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms