RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 IRAK3Q9Y616 596 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 LACTBL1A8MY62 500 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 ANKRD63C9JTQ0 380 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 PODXLO00592 558 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 TEX28O15482 410 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 MBTPS2O43462 519 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 TBX10O75333 385 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 KIF4AO95239 1232 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 GLUD1P00367 558 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 SLFN14P0C7P3 912 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 CXCL8P10145 99 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 IL9P15248 144 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 KCNE1P15382 129 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 EPCAMP16422 314 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 MCM4P33991 863 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 ANP32AP39687 249 aaKnown RBP7.13□□□□□ -1.27
TRAF4-213ENST00000578917 TNFSF9P41273 254 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 SYKP43405 635 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 ARPP19P56211 112 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 DSG1Q02413 1049 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 ITIH3Q06033 890 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 COASYQ13057 564 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 SMAD4Q13485 552 aaKnown RBP7.13□□□□□ -1.27
TRAF4-213ENST00000578917 COL19A1Q14993 1142 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 UPP1Q16831 310 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 SLC10A6Q3KNW5 377 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 RARS2Q5T160 578 aaKnown RBP7.13□□□□□ -1.27
TRAF4-213ENST00000578917 L1TD1Q5T7N2 865 aaKnown RBP7.13□□□□□ -1.27
TRAF4-213ENST00000578917 KIAA0319Q5VV43 1072 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 PRSS55Q6UWB4 352 aaPredicted RBP7.13□□□□□ -1.27
TRAF4-213ENST00000578917 ALKAL1Q6UXT8 129 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 TMEM184AQ6ZMB5 413 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 CD302Q8IX05 232 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 C12orf76Q8N812 135 aaPredicted RBP7.13□□□□□ -1.27
TRAF4-213ENST00000578917 FSIP1Q8NA03 581 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 BEST2Q8NFU1 509 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 HPS3Q969F9 1004 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 CHAMP1Q96JM3 812 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 RPGRIP1Q96KN7 1286 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 FBXL18Q96ME1 805 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 RIPOR3Q96MK2 946 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 PPP1R10Q96QC0 940 aaKnown RBP7.13□□□□□ -1.27
TRAF4-213ENST00000578917 C7orf25Q9BPX7 421 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 FAM213AQ9BRX8 229 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 HERC2P3Q9BVR0 1158 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 TRIM9Q9C026 710 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 ST6GALNAC4Q9H4F1 302 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 PIDD1Q9HB75 910 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 GOLGA2P5Q9HBQ8 144 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 OLFML3Q9NRN5 406 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 DZANK1Q9NVP4 752 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 MARCH5Q9NX47 278 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 CNTN3Q9P232 1028 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 PRKAG3Q9UGI9 489 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 USP25Q9UHP3 1055 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 SERTAD1Q9UHV2 236 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 ZDHHC9Q9Y397 364 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 USP15Q9Y4E8 981 aaPredicted RBP7.13□□□□□ -1.27
TRAF4-213ENST00000578917 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.13□□□□□ -1.27
TRAF4-213ENST00000578917 HCFC2Q9Y5Z7 792 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 BRWD1Q9NSI6 2320 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 VCANP13611 3396 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 GBF1Q92538 1859 aa7.13□□□□□ -1.27
TRAF4-213ENST00000578917 PVALEFA0A1B0GWK0 134 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 TISP43B9A030 160 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 I3L4J1 428 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 PRPF6O94906 941 aaKnown RBP7.12□□□□□ -1.27
TRAF4-213ENST00000578917 IL18RAPO95256 599 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 GLP2RO95838 553 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 LDHAP00338 332 aaKnown RBP7.12□□□□□ -1.27
TRAF4-213ENST00000578917 PIGRP01833 764 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 WEE2P0C1S8 567 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 PFKFB1P16118 471 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 RPL17P18621 184 aaKnown RBP7.12□□□□□ -1.27
TRAF4-213ENST00000578917 OR1D2P34982 312 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 CLCN4P51793 760 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 KCNA1Q09470 495 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 CBX2Q14781 532 aaPredicted RBP7.12□□□□□ -1.27
TRAF4-213ENST00000578917 TMEM132DQ14C87 1099 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 SMAD2Q15796 467 aaKnown RBP7.12□□□□□ -1.27
TRAF4-213ENST00000578917 ENOX2Q16206 610 aaKnown RBP7.12□□□□□ -1.27
TRAF4-213ENST00000578917 E2F4Q16254 413 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 PSMD5Q16401 504 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 FAM26FQ5R3K3 315 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 ZBTB41Q5SVQ8 909 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 LIN9Q5TKA1 542 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 ARMCX5Q6P1M9 558 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 TMC5Q6UXY8 1006 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 DSTYKQ6XUX3 929 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.12□□□□□ -1.27
TRAF4-213ENST00000578917 ANKS3Q6ZW76 656 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 USP37Q86T82 979 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 ADHFE1Q8IWW8 467 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 GRAMD1CQ8IYS0 662 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 SMRP1Q8NCR6 262 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 APPL2Q8NEU8 664 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 VN1R2Q8NFZ6 395 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 CACTINQ8WUQ7 758 aaKnown RBP7.12□□□□□ -1.27
TRAF4-213ENST00000578917 SAAL1Q96ER3 474 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 PAGE5Q96GU1 130 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms