RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 B4GALT5O43286 388 aa29.76■■■□□ 2.35
LIMD2-203ENST00000578067 TMOD1P28289 359 aa29.76■■■□□ 2.35
LIMD2-203ENST00000578067 TMEM132AQ24JP5 1023 aa29.76■■■□□ 2.35
LIMD2-203ENST00000578067 SPOPLQ6IQ16 392 aa29.76■■■□□ 2.35
LIMD2-203ENST00000578067 DDX1Q92499 740 aaKnown RBP29.76■■■□□ 2.35
LIMD2-203ENST00000578067 IFT122Q9HBG6 1241 aa29.76■■■□□ 2.35
LIMD2-203ENST00000578067 VSNL1P62760 191 aa29.75■■■□□ 2.35
LIMD2-203ENST00000578067 TCEAL1Q15170 157 aa29.75■■■□□ 2.35
LIMD2-203ENST00000578067 TAF1CQ15572 869 aaPredicted RBP29.75■■■□□ 2.35
LIMD2-203ENST00000578067 DGKDQ16760 1214 aa29.75■■■□□ 2.35
LIMD2-203ENST00000578067 ZNF568Q3ZCX4 644 aa29.75■■■□□ 2.35
LIMD2-203ENST00000578067 MTHFD1LQ6UB35 978 aa29.75■■■□□ 2.35
LIMD2-203ENST00000578067 CALR3Q96L12 384 aaKnown RBP29.75■■■□□ 2.35
LIMD2-203ENST00000578067 RNF216Q9NWF9 866 aaPredicted RBP29.75■■■□□ 2.35
LIMD2-203ENST00000578067 OGFRQ9NZT2 677 aa29.75■■■□□ 2.35
LIMD2-203ENST00000578067 TNFSF13BQ9Y275 285 aa29.75■■■□□ 2.35
LIMD2-203ENST00000578067 BUB1BO60566 1050 aaPredicted RBP29.74■■■□□ 2.35
LIMD2-203ENST00000578067 ERLIN1O75477 346 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 HADHBP55084 474 aaKnown RBP29.74■■■□□ 2.35
LIMD2-203ENST00000578067 GPC5P78333 572 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 MAP2K5Q13163 448 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 NCOA4Q13772 614 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 NT5DC3Q86UY8 548 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 IFNLR1Q8IU57 520 aaPredicted RBP29.74■■■□□ 2.35
LIMD2-203ENST00000578067 PBKQ96KB5 322 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 APOBEC3GQ9HC16 384 aaKnown RBP29.74■■■□□ 2.35
LIMD2-203ENST00000578067 AKT3Q9Y243 479 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 FAM170AA1A519 330 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 KCNK3O14649 394 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 ATP8B1O43520 1251 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 TNFAIP2Q03169 654 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 CUL2Q13617 745 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 FAM187BQ17R55 369 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 CCDC70Q6NSX1 233 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 ABCB6Q9NP58 842 aa29.74■■■□□ 2.35
LIMD2-203ENST00000578067 A0A087WZ62 844 aa29.73■■■□□ 2.35
LIMD2-203ENST00000578067 IQCF3P0C7M6 154 aa29.73■■■□□ 2.35
LIMD2-203ENST00000578067 BPIFB4P59827 614 aa29.73■■■□□ 2.35
LIMD2-203ENST00000578067 EEF1DP3Q658K8 133 aa29.73■■■□□ 2.35
LIMD2-203ENST00000578067 FDXACB1Q9BRP7 624 aaPredicted RBP29.73■■■□□ 2.35
LIMD2-203ENST00000578067 AMFRQ9UKV5 643 aa29.73■■■□□ 2.35
LIMD2-203ENST00000578067 MCM3P25205 808 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 PPFIA1Q13136 1202 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 THNSL1Q8IYQ7 743 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 FAM212AQ96EL1 285 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 COG5Q9UP83 839 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 PCDHB2Q9Y5E7 798 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 SPDYE4A6NLX3 237 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 ADCY6O43306 1168 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 CLTAP09496 248 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 TBXAS1P24557 533 aaPredicted RBP29.72■■■□□ 2.35
LIMD2-203ENST00000578067 NOP14P78316 857 aaKnown RBP29.72■■■□□ 2.35
LIMD2-203ENST00000578067 IRF5Q13568 498 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 GRIK4Q16099 956 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 DUOXA2Q1HG44 320 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 CTTNBP2NLQ9P2B4 639 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 TRPM7Q96QT4 1865 aa29.72■■■□□ 2.35
LIMD2-203ENST00000578067 ECM2O94769 699 aaPredicted RBP29.71■■■□□ 2.35
LIMD2-203ENST00000578067 ACO1P21399 889 aaKnown RBP29.71■■■□□ 2.35
LIMD2-203ENST00000578067 PTPROQ16827 1216 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 LONRF2Q1L5Z9 754 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 ZNF677Q86XU0 584 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 HES6Q96HZ4 224 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 SELENOOQ9BVL4 669 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 IMPG2Q9BZV3 1241 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 CDT1Q9H211 546 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 NUB1Q9Y5A7 615 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 EVPLQ92817 2033 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 VTNP04004 478 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 RGMBQ6NW40 437 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 FAM53CQ9NYF3 392 aa29.71■■■□□ 2.35
LIMD2-203ENST00000578067 PRAMEF19Q5SWL8 479 aa29.7■■■□□ 2.34
LIMD2-203ENST00000578067 CDR2LQ86X02 465 aaPredicted RBP29.7■■■□□ 2.34
LIMD2-203ENST00000578067 MTMR12Q9C0I1 747 aa29.7■■■□□ 2.34
LIMD2-203ENST00000578067 RBM12Q9NTZ6 932 aaKnown RBP29.7■■■□□ 2.34
LIMD2-203ENST00000578067 CST3P01034 146 aaPredicted RBP29.69■■■□□ 2.34
LIMD2-203ENST00000578067 HOXC6P09630 235 aa29.69■■■□□ 2.34
LIMD2-203ENST00000578067 AMHR2Q16671 573 aa29.69■■■□□ 2.34
LIMD2-203ENST00000578067 MARCH8Q5T0T0 291 aa29.69■■■□□ 2.34
LIMD2-203ENST00000578067 ACAD10Q6JQN1 1059 aa29.69■■■□□ 2.34
LIMD2-203ENST00000578067 SAPCD2Q86UD0 394 aa29.69■■■□□ 2.34
LIMD2-203ENST00000578067 PPP1R16BQ96T49 567 aa29.69■■■□□ 2.34
LIMD2-203ENST00000578067 DYNC1LI2O43237 492 aaPredicted RBP29.69■■■□□ 2.34
LIMD2-203ENST00000578067 ZEB2O60315 1214 aa29.69■■■□□ 2.34
LIMD2-203ENST00000578067 TBC1D8O95759 1140 aa29.69■■■□□ 2.34
LIMD2-203ENST00000578067 CLEC16AQ2KHT3 1053 aa29.69■■■□□ 2.34
LIMD2-203ENST00000578067 BEND6Q5SZJ8 279 aaPredicted RBP29.69■■■□□ 2.34
LIMD2-203ENST00000578067 PCDHB4Q9Y5E5 795 aa29.69■■■□□ 2.34
LIMD2-203ENST00000578067 ZSWIM8A7E2V4 1837 aa29.68■■■□□ 2.34
LIMD2-203ENST00000578067 B4GALT4O60513 344 aa29.68■■■□□ 2.34
LIMD2-203ENST00000578067 CLSTN1O94985 981 aa29.68■■■□□ 2.34
LIMD2-203ENST00000578067 ASS1P00966 412 aaKnown RBP29.68■■■□□ 2.34
LIMD2-203ENST00000578067 OSTNP61366 133 aa29.68■■■□□ 2.34
LIMD2-203ENST00000578067 C17orf99Q6UX52 265 aa29.68■■■□□ 2.34
LIMD2-203ENST00000578067 CEP120Q8N960 986 aa29.68■■■□□ 2.34
LIMD2-203ENST00000578067 LRRC1Q9BTT6 524 aa29.68■■■□□ 2.34
LIMD2-203ENST00000578067 CNTN6Q9UQ52 1028 aa29.68■■■□□ 2.34
LIMD2-203ENST00000578067 UMODL1Q5DID0 1318 aa29.68■■■□□ 2.34
LIMD2-203ENST00000578067 MTA2O94776 668 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 CALCAP01258 141 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms