RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TDRD12Q587J7 1177 aaKnown RBP20.02■□□□□ 0.8
PRKCA-203ENST00000578063 ENOSF1Q7L5Y1 443 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 PPP1R13BQ96KQ4 1090 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 DEFB118Q96PH6 123 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 DESI2Q9BSY9 194 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 MTMR12Q9C0I1 747 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 DEF6Q9H4E7 631 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 C1orf112Q9NSG2 853 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 TRMT1Q9NXH9 659 aaKnown RBP20.02■□□□□ 0.8
PRKCA-203ENST00000578063 USP27XA6NNY8 438 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 LRRN2O75325 713 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 IPO7O95373 1038 aaKnown RBP20.02■□□□□ 0.79
PRKCA-203ENST00000578063 TNNC2P02585 160 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 PRKCIP41743 596 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 MFAP3P55082 362 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 TFAMQ00059 246 aaKnown RBP20.02■□□□□ 0.79
PRKCA-203ENST00000578063 GCNT1Q02742 428 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 KLHL30Q0D2K2 578 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 MTFR1Q15390 333 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 TRAPPC11Q7Z392 1133 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 NT5DC4Q86YG4 428 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 EFCAB13Q8IY85 973 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 PPM1KQ8N3J5 372 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 FAM84AQ96KN4 292 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 EIF2AQ9BY44 585 aaKnown RBP20.02■□□□□ 0.79
PRKCA-203ENST00000578063 IMPG2Q9BZV3 1241 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 RNF208Q9H0X6 261 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 PLEKHA5Q9HAU0 1116 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 OGDHLQ9ULD0 1010 aa20.02■□□□□ 0.79
PRKCA-203ENST00000578063 CEP350Q5VT06 3117 aa20.01■□□□□ 0.79
PRKCA-203ENST00000578063 LACTBL1A8MY62 500 aa20.01■□□□□ 0.79
PRKCA-203ENST00000578063 EIF3CLB5ME19 914 aaKnown RBP20.01■□□□□ 0.79
PRKCA-203ENST00000578063 ARVCFO00192 962 aa20.01■□□□□ 0.79
PRKCA-203ENST00000578063 VNN1O95497 513 aa20.01■□□□□ 0.79
PRKCA-203ENST00000578063 CLCN1P35523 988 aa20.01■□□□□ 0.79
PRKCA-203ENST00000578063 NCOA4Q13772 614 aa20.01■□□□□ 0.79
PRKCA-203ENST00000578063 TRIM71Q2Q1W2 868 aaKnown RBP20.01■□□□□ 0.79
PRKCA-203ENST00000578063 SLC10A6Q3KNW5 377 aa20.01■□□□□ 0.79
PRKCA-203ENST00000578063 CTU1Q7Z7A3 348 aaKnown RBP20.01■□□□□ 0.79
PRKCA-203ENST00000578063 HELQQ8TDG4 1101 aa20.01■□□□□ 0.79
PRKCA-203ENST00000578063 DHX38Q92620 1227 aaKnown RBP20.01■□□□□ 0.79
PRKCA-203ENST00000578063 EIF3CQ99613 913 aaKnown RBP20.01■□□□□ 0.79
PRKCA-203ENST00000578063 GPR88Q9GZN0 384 aa20.01■□□□□ 0.79
PRKCA-203ENST00000578063 C2CD2Q9Y426 696 aa20.01■□□□□ 0.79
PRKCA-203ENST00000578063 CENPFP49454 3210 aa20.01■□□□□ 0.79
PRKCA-203ENST00000578063 PLEKP08567 350 aaPredicted RBP20■□□□□ 0.79
PRKCA-203ENST00000578063 HSPA8P11142 646 aaKnown RBP20■□□□□ 0.79
PRKCA-203ENST00000578063 ANXA13P27216 316 aa20■□□□□ 0.79
PRKCA-203ENST00000578063 EIF4A3P38919 411 aaKnown RBP20■□□□□ 0.79
PRKCA-203ENST00000578063 YARSP54577 528 aaKnown RBP20■□□□□ 0.79
PRKCA-203ENST00000578063 KRT83P78385 493 aa20■□□□□ 0.79
PRKCA-203ENST00000578063 ARID5AQ03989 594 aa20■□□□□ 0.79
PRKCA-203ENST00000578063 ARHGAP44Q17R89 818 aa20■□□□□ 0.79
PRKCA-203ENST00000578063 FAM26DQ5JW98 314 aa20■□□□□ 0.79
PRKCA-203ENST00000578063 IRF2BP2Q7Z5L9 587 aa20■□□□□ 0.79
PRKCA-203ENST00000578063 CHST12Q9NRB3 414 aa20■□□□□ 0.79
PRKCA-203ENST00000578063 GPR182O15218 404 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 MEFVO15553 781 aaPredicted RBP19.99■□□□□ 0.79
PRKCA-203ENST00000578063 AKR1B10O60218 316 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 NFICP08651 508 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 KIF11P52732 1056 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 ACRBPQ8NEB7 543 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 PI4K2AQ9BTU6 479 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 ST3GAL5Q9UNP4 418 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 SQORQ9Y6N5 450 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 EVI5O60447 810 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 GFPT2O94808 682 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 TRPC3Q13507 836 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 TMEM132DQ14C87 1099 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 SPA17Q15506 151 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 FBXO47Q5MNV8 452 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 UBXN11Q5T124 520 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 TWF2Q6IBS0 349 aaKnown RBP19.99■□□□□ 0.79
PRKCA-203ENST00000578063 JADE1Q6IE81 842 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 REXO1L1PQ8IX06 675 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 SHC3Q92529 594 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 SNX27Q96L92 541 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 KREMEN1Q96MU8 473 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 HAUS4Q9H6D7 363 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 SNTG2Q9NY99 539 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 DERAQ9Y315 318 aa19.99■□□□□ 0.79
PRKCA-203ENST00000578063 LCA5LO95447 670 aa19.98■□□□□ 0.79
PRKCA-203ENST00000578063 NOP14P78316 857 aaKnown RBP19.98■□□□□ 0.79
PRKCA-203ENST00000578063 ASTE1Q2TB18 679 aaPredicted RBP19.98■□□□□ 0.79
PRKCA-203ENST00000578063 FBXO46Q6PJ61 603 aaPredicted RBP19.98■□□□□ 0.79
PRKCA-203ENST00000578063 GPIHBP1Q8IV16 184 aa19.98■□□□□ 0.79
PRKCA-203ENST00000578063 USP38Q8NB14 1042 aa19.98■□□□□ 0.79
PRKCA-203ENST00000578063 JAKMIP2Q96AA8 810 aa19.98■□□□□ 0.79
PRKCA-203ENST00000578063 TRPV6Q9H1D0 765 aa19.98■□□□□ 0.79
PRKCA-203ENST00000578063 NXF3Q9H4D5 531 aaKnown RBP19.98■□□□□ 0.79
PRKCA-203ENST00000578063 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.98■□□□□ 0.792e-6■■■■■ 101.8
PRKCA-203ENST00000578063 FOXN3O00409 490 aaPredicted RBP19.97■□□□□ 0.79
PRKCA-203ENST00000578063 ASS1P00966 412 aaKnown RBP19.97■□□□□ 0.79
PRKCA-203ENST00000578063 PNMA6AP0CW24 399 aaPredicted RBP19.97■□□□□ 0.79
PRKCA-203ENST00000578063 TBXAS1P24557 533 aaPredicted RBP19.97■□□□□ 0.79
PRKCA-203ENST00000578063 NFX1Q12986 1120 aaKnown RBP19.97■□□□□ 0.79
PRKCA-203ENST00000578063 SGSM1Q2NKQ1 1148 aa19.97■□□□□ 0.79
PRKCA-203ENST00000578063 VPS36Q86VN1 386 aa19.97■□□□□ 0.79
PRKCA-203ENST00000578063 KAT5Q92993 513 aa19.97■□□□□ 0.79
PRKCA-203ENST00000578063 TATDN2Q93075 761 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms