RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 TMEM161BQ8NDZ6 487 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 PRSS33Q8NF86 280 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 ACAP3Q96P50 834 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 PNMA5Q96PV4 448 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 AVENQ9NQS1 362 aaPredicted RBP15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 SMC3Q9UQE7 1217 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 VPS13AQ96RL7 3174 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 PP2D1A8MPX8 630 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 RFPL2O75678 378 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 MAPTP10636 758 aaKnown RBP15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 PAX3P23760 479 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 LONP1P36776 959 aaKnown RBP15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 ZNF131P52739 623 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 MCL1Q07820 350 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 TCF15Q12870 199 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 STRN3Q13033 797 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 IER5LQ5T953 404 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 LIN9Q5TKA1 542 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 ASTLQ6HA08 431 aaPredicted RBP15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 SLC8B1Q6J4K2 584 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 CD300LGQ6UXG3 332 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 PALB2Q86YC2 1186 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 CDK5RAP3Q96JB5 506 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 SNX27Q96L92 541 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 OXCT2Q9BYC2 517 aaPredicted RBP15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 KCNH3Q9ULD8 1083 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 GDAQ9Y2T3 454 aa15.88■□□□□ 0.13
SMARCE1-213ENST00000578044 ZFHX2Q9C0A1 2572 aaPredicted RBP15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 NOTCH4Q99466 2003 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 PROB1E7EW31 1015 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 GALR2O43603 387 aaPredicted RBP15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 N4BP1O75113 896 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 XYLBO75191 536 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 CD2BP2O95400 341 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 PIGRP01833 764 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 ASGR2P07307 311 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 ADRB2P07550 413 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 PLA2G4BP0C869 781 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 LAMP2P13473 410 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 SP100P23497 879 aaPredicted RBP15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 CDC25AP30304 524 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 MRE11P49959 708 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 NCKAP1LP55160 1127 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 POU5F1Q01860 360 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 NOLC1Q14978 699 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 LARP1BQ659C4 914 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 RTP3Q9BQQ7 232 aa15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 TARS2Q9BW92 718 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-213ENST00000578044 VWA3AA6NCI4 1184 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 CLDN3O15551 220 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 TBC1D4O60343 1298 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 SRFP11831 508 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 CYP3A5P20815 502 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 UBA7P41226 1012 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 CLCNKBP51801 687 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 VCPP55072 806 aaKnown RBP15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 MRPL58Q14197 206 aaKnown RBP15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 PRSS55Q6UWB4 352 aaPredicted RBP15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 ZNF461Q8TAF7 563 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 CALML4Q96GE6 196 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 B3GALT6Q96L58 329 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 CCSER1Q9C0I3 900 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 CXCL16Q9H2A7 254 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 PIDD1Q9HB75 910 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 SLC2A4RGQ9NR83 387 aa15.86■□□□□ 0.13
SMARCE1-213ENST00000578044 MYO15AQ9UKN7 3530 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 ARHGEF37A1IGU5 675 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 SLC16A4O15374 487 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 MICAL2O94851 1124 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 ABLIM3O94929 683 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 C8AP07357 584 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 CLTAP09496 248 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 LIG1P18858 919 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 AOC1P19801 751 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 ARSHQ5FYA8 562 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 PPM1LQ5SGD2 360 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 TPGS2Q68CL5 300 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 CEP57Q86XR8 500 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 SLC44A3Q8N4M1 653 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 CEP120Q8N960 986 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 INTS4Q96HW7 963 aaKnown RBP15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 SUSD3Q96L08 255 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 ZMAT2Q96NC0 199 aaKnown RBP15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 MYADMQ96S97 322 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 TCHPQ9BT92 498 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 ST6GALNAC4Q9H4F1 302 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 CDH7Q9ULB5 785 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 USP20Q9Y2K6 914 aa15.85■□□□□ 0.13
SMARCE1-213ENST00000578044 CFAP54Q96N23 3096 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 TTC26A0AVF1 554 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 H7C4K7 107 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 RPL17P18621 184 aaKnown RBP15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 LRPAP1P30533 357 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 GBP2P32456 591 aaPredicted RBP15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 OR1D2P34982 312 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 SOX4Q06945 474 aaPredicted RBP15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 HTR4Q13639 388 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 ZBTB6Q15916 424 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 SLC10A6Q3KNW5 377 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 AXDND1Q5T1B0 1012 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms