RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 FERMT3Q86UX7 667 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 TCP11Q8WWU5 503 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 TCEAL4Q96EI5 215 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 ASB16Q96NS5 453 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 CORO1BQ9BR76 489 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 TMEM121BQ9BXQ6 578 aaPredicted RBP15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 SMOC1Q9H4F8 434 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 PPME1Q9Y570 386 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 CDY1Q9Y6F8 540 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 PDCD11Q14690 1871 aaKnown RBP15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 NRG2O14511 850 aaPredicted RBP15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 NPTXRO95502 500 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 LRG1P02750 347 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 HOXA6P31267 233 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 RAP1GAPP47736 663 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 QARSP47897 775 aaKnown RBP15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 PTENP60484 403 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 EMC2Q15006 297 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 Q4G0T1 1027 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 PRSS36Q5K4E3 855 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 PLA2G2CQ5R387 149 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 DEPDC1BQ8WUY9 529 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 ZCCHC14Q8WYQ9 949 aaKnown RBP15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 SMARCD2Q92925 531 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 C2orf42Q9NWW7 574 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 MTRRQ9UBK8 725 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 WASF3Q9UPY6 502 aa15.67■□□□□ 0.1
PPP4R1-206ENST00000577779 WDR27A2RRH5 827 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 ZNF197O14709 1029 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 RPP40O75818 363 aaKnown RBP15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 ARF4P18085 180 aaPredicted RBP15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 HOXC13P31276 330 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 VIPR2P41587 438 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 AAMPQ13685 434 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 CREB3L3Q68CJ9 461 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 SLC27A1Q6PCB7 646 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 C1orf228Q6PIY5 440 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 KBTBD6Q86V97 674 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 CDR2LQ86X02 465 aaPredicted RBP15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 CSGALNACT1Q8TDX6 532 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 GAB3Q8WWW8 586 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 GATA6Q92908 595 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 MSANTD3Q96H12 275 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 VPS45Q9NRW7 570 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 NAP1L2Q9ULW6 460 aaPredicted RBP15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 PCDHGA5Q9Y5G8 931 aa15.66■□□□□ 0.1
PPP4R1-206ENST00000577779 KLF18A0A0U1RQI7 1052 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 PRRG1O14668 218 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 DKC1O60832 514 aaKnown RBP eCLIP15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 MICAL2O94851 1124 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 TOP3BO95985 862 aaKnown RBP15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 ADD1P35611 737 aaKnown RBP15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 MPLP40238 635 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 KPNA1P52294 538 aaPredicted RBP15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 MLLT6P55198 1093 aaPredicted RBP15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 MBTD1Q05BQ5 628 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 SPIRE1Q08AE8 756 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 TFDP1Q14186 410 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 MXD4Q14582 209 aaPredicted RBP15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 AMHR2Q16671 573 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 DGKKQ5KSL6 1271 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 TCEAL6Q6IPX3 200 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 PDZD4Q76G19 769 aaPredicted RBP15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 TCEAL3Q969E4 200 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 TCEANC2Q96MN5 208 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 ZSWIM3Q96MP5 696 aa15.65■□□□□ 0.1
PPP4R1-206ENST00000577779 ARHGEF37A1IGU5 675 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 SLC38A8A6NNN8 435 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 ARNTLO00327 626 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 B4GALT5O43286 388 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 TDP2O95551 362 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 CCDC192P0DO97 292 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 FGFR3P22607 806 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 ELF1P32519 619 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 CCR2P41597 374 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 SOX9P48436 509 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 MFSD6LQ8IWD5 586 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 CCDC148Q8NFR7 591 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 ETNPPLQ8TBG4 499 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 TBCKQ8TEA7 893 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 MTRQ99707 1265 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 EDEM2Q9BV94 578 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 SCNM1Q9BWG6 230 aa15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 LSG1Q9H089 658 aaKnown RBP15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 C8orf33Q9H7E9 229 aaPredicted RBP15.64■□□□□ 0.09
PPP4R1-206ENST00000577779 CCDC196A0A1B0GTZ2 297 aa15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 C4orf47A7E2U8 309 aa15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 TAF4O00268 1085 aa15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 EML1O00423 815 aa15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 THP07101 528 aa15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 PXNP49023 591 aaPredicted RBP15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 WDR44Q5JSH3 913 aa15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 CYP4A22Q5TCH4 519 aa15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 SH3PXD2AQ5TCZ1 1133 aa15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 DAB2IPQ5VWQ8 1189 aa15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 IFNLR1Q8IU57 520 aaPredicted RBP15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 YAF2Q8IY57 180 aa15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 FAM200AQ8TCP9 573 aa15.63■□□□□ 0.09
PPP4R1-206ENST00000577779 SLKQ9H2G2 1235 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms