RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 NR2F2P24468 414 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CD52P31358 61 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 VCPP55072 806 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CLDN10P78369 228 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 PAK2Q13177 524 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 DCAF4L1Q3SXM0 396 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CDKAL1Q5VV42 579 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 EEF1DP3Q658K8 133 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 KLHL10Q6JEL2 608 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ARMCX5Q6P1M9 558 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 FRMD5Q7Z6J6 570 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 RTN4RL1Q86UN2 441 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CSGALNACT2Q8N6G5 542 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 XXYLT1Q8NBI6 393 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ZBTB45Q96K62 511 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 TGS1Q96RS0 853 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 TSPAN18Q96SJ8 248 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CBWD1Q9BRT8 395 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 SRRTQ9BXP5 876 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CDT1Q9H211 546 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 TLR9Q9NR96 1032 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 HSPBP1Q9NZL4 362 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CPSF3Q9UKF6 684 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 AGO2Q9UKV8 859 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 NFE2L3Q9Y4A8 694 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 SCN5AQ14524 2016 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 TANC1Q9C0D5 1861 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 TISP43B9A030 160 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 C9IYK1 514 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ENPP3O14638 875 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CLIC2O15247 247 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 SLC16A3O15427 465 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 EXTL3O43909 919 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 AKAP3O75969 853 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 BAIAP3O94812 1187 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 EOMESO95936 686 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ZSCAN20P17040 1043 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 GRM5P41594 1212 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 RAB27AP51159 221 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 STX17P56962 302 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ZXDAP98168 799 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 NFX1Q12986 1120 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 NOLC1Q14978 699 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 XKR4Q5GH76 650 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CNKSR3Q6P9H4 555 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ALKAL1Q6UXT8 129 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 SLC24A5Q71RS6 500 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 DGLUCYQ7Z3D6 616 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 GPD1LQ8N335 351 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 DBF4BQ8NFT6 615 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 RSPH1Q8WYR4 309 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 POMGNT1Q8WZA1 660 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 SEPT8Q92599 483 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 BICD1Q96G01 975 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CPB2Q96IY4 423 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ADPGKQ9BRR6 497 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ELAC1Q9H777 363 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 PLEKHA5Q9HAU0 1116 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 METTL14Q9HCE5 456 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 C1orf112Q9NSG2 853 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 FANCLQ9NW38 375 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 USP20Q9Y2K6 914 aa12.12□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ABHD14A-ACY1A0A1B0GW23 586 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 PMM2O15305 246 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 INPPL1O15357 1258 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 MGEA5O60502 916 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 EFCAB14O75071 495 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CLTAP09496 248 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 PSMC2P35998 433 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 UVSSAQ2YD98 709 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CD302Q8IX05 232 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 SMG8Q8ND04 991 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 TMC2Q8TDI7 906 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 RMDN1Q96DB5 314 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 MRPL38Q96DV4 380 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 TCHPQ9BT92 498 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 MSTO1Q9BUK6 570 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 FAM105AQ9NUU6 356 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 RNF216Q9NWF9 866 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 PIN4Q9Y237 131 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 FRMD4BQ9Y2L6 1034 aa12.11□□□□□ -0.47
CDK5RAP3-204ENST00000577664 TET1Q8NFU7 2136 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 FSD2A1L4K1 749 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 LINC01553A4QN01 128 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ZNF233A6NK53 670 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 BECN2A8MW95 431 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 EXOC3O60645 756 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 LTBRP36941 435 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CASP4P49662 377 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 SIGLEC14Q08ET2 396 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 SNRNP35Q16560 246 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ZNF568Q3ZCX4 644 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 TIGD5Q53EQ6 642 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 INTS8Q75QN2 995 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 APTXQ7Z2E3 356 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
CDK5RAP3-204ENST00000577664 LUZP1Q86V48 1076 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms