RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
RARA-208ENST00000577646 CCNE1P24864 410 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 CTNNB1P35222 781 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 ACOT2P49753 483 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 AP3M2P53677 418 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 MCCD1P59942 119 aaPredicted RBP13.44□□□□□ -0.26
RARA-208ENST00000577646 FKBP3Q00688 224 aaKnown RBP13.44□□□□□ -0.26
RARA-208ENST00000577646 ELAVL2Q12926 359 aaKnown RBP13.44□□□□□ -0.26
RARA-208ENST00000577646 NAB2Q15742 525 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 PTPROQ16827 1216 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 KLHL40Q2TBA0 621 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 ZCWPW2Q504Y3 356 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 DCLRE1AQ6PJP8 1040 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 MKNK1Q9BUB5 465 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 MIOSQ9NXC5 875 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 RBAKQ9NYW8 714 aaPredicted RBP13.44□□□□□ -0.26
RARA-208ENST00000577646 KLK14Q9P0G3 267 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 FRMD4BQ9Y2L6 1034 aa13.44□□□□□ -0.26
RARA-208ENST00000577646 CHD7Q9P2D1 2997 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 TISP43B9A030 160 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 TMEM189-UBE2V1I3L0A0 370 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 CETN3O15182 167 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 TRAPPC3O43617 180 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 ZC3H11AO75152 810 aaKnown RBP eCLIP13.43□□□□□ -0.26
RARA-208ENST00000577646 DDHD2O94830 711 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 FGFR1OPO95684 399 aaKnown RBP13.43□□□□□ -0.26
RARA-208ENST00000577646 NR3C1P04150 777 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 CXCL8P10145 99 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 GPM6BQ13491 265 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 SNRNP35Q16560 246 aaKnown RBP13.43□□□□□ -0.26
RARA-208ENST00000577646 ZNF280BQ86YH2 543 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 SLC39A11Q8N1S5 342 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 BEST2Q8NFU1 509 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 PPM1EQ8WY54 764 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 ARNTL2Q8WYA1 636 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 GBF1Q92538 1859 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 TMEM169Q96HH4 297 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 MFSD14AQ96MC6 490 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 C17orf80Q9BSJ5 609 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 PCIF1Q9H4Z3 704 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 CERS4Q9HA82 394 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 PLAGL2Q9UPG8 496 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 SSX2IPQ9Y2D8 614 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 TRANK1O15050 2925 aa13.43□□□□□ -0.26
RARA-208ENST00000577646 MYO9BQ13459 2157 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 ARHGEF37A1IGU5 675 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 FSD2A1L4K1 749 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 PPP1R3GB7ZBB8 358 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 NRP1O14786 923 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 IKBKBO14920 756 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 CLIC2O15247 247 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 FGF18O76093 207 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 ERCC5P28715 1186 aaPredicted RBP13.42□□□□□ -0.26
RARA-208ENST00000577646 LRPAP1P30533 357 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 PSMC2P35998 433 aaKnown RBP13.42□□□□□ -0.26
RARA-208ENST00000577646 TNFSF9P41273 254 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 AFF1P51825 1210 aaKnown RBP13.42□□□□□ -0.26
RARA-208ENST00000577646 NLRP12P59046 1061 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 ADAM9Q13443 819 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 TMEM132DQ14C87 1099 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 PSMD6Q15008 389 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 SPATA1Q5VX52 437 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 DDX53Q86TM3 631 aaKnown RBP13.42□□□□□ -0.26
RARA-208ENST00000577646 ZC3H3Q8IXZ2 948 aaKnown RBP13.42□□□□□ -0.26
RARA-208ENST00000577646 KLHL23Q8NBE8 558 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 TMC2Q8TDI7 906 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 KIF12Q96FN5 646 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 IGSF21Q96ID5 467 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 CEP63Q96MT8 703 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 MAPK8IP1Q9UQF2 711 aa13.42□□□□□ -0.26
RARA-208ENST00000577646 CITO14578 2027 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 SLC16A3O15427 465 aaKnown RBP13.41□□□□□ -0.26
RARA-208ENST00000577646 GNA14O95837 355 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 C1RP00736 705 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 BMP6P22004 513 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 NR2F2P24468 414 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 OR1G1P47890 313 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 SLC11A1P49279 550 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 CYP2J2P51589 502 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 CLDN10P78369 228 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 PAK1Q13153 545 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 ADGRE1Q14246 886 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 UPP1Q16831 310 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 DUOXA2Q1HG44 320 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 SEZ6Q53EL9 994 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 PDXDC1Q6P996 788 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 SASS6Q6UVJ0 657 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 INTS8Q75QN2 995 aaKnown RBP13.41□□□□□ -0.26
RARA-208ENST00000577646 WDR49Q8IV35 697 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 SPPL3Q8TCT6 385 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 ERCC4Q92889 916 aaPredicted RBP13.41□□□□□ -0.26
RARA-208ENST00000577646 PPP2R3CQ969Q6 453 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 SAAL1Q96ER3 474 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 ZMAT2Q96NC0 199 aaKnown RBP13.41□□□□□ -0.26
RARA-208ENST00000577646 FNBP1Q96RU3 617 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 IKZF4Q9H2S9 585 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 METTL14Q9HCE5 456 aaKnown RBP13.41□□□□□ -0.26
RARA-208ENST00000577646 NGRNQ9NPE2 291 aaKnown RBP13.41□□□□□ -0.26
RARA-208ENST00000577646 DNAJB4Q9UDY4 337 aa13.41□□□□□ -0.26
RARA-208ENST00000577646 RWDD2AQ9UIY3 292 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms