RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 KYAT1Q16773 422 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 PTPN21Q16825 1174 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 UPP1Q16831 310 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 SEZ6Q53EL9 994 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 LIN9Q5TKA1 542 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 CYP26C1Q6V0L0 522 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 CCDC73Q6ZRK6 1079 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 OTOP3Q7RTS5 596 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 CMASQ8NFW8 434 aaPredicted RBP16.94■□□□□ 0.3
SF3B3-215ENST00000577085 PIK3R5Q8WYR1 880 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 STAMQ92783 540 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 ZNF396Q96N95 335 aaPredicted RBP16.94■□□□□ 0.3
SF3B3-215ENST00000577085 CLIC6Q96NY7 704 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 GOLGA2P5Q9HBQ8 144 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 USTQ9Y2C2 406 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 NUB1Q9Y5A7 615 aa16.94■□□□□ 0.3
SF3B3-215ENST00000577085 PODXLO00592 558 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 PDIA4P13667 645 aaKnown RBP16.93■□□□□ 0.3
SF3B3-215ENST00000577085 KCNE1P15382 129 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 STAT6P42226 847 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 ZNF131P52739 623 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 MCL1Q07820 350 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 MTMR3Q13615 1198 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 SLC39A14Q15043 492 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 ALKAL1Q6UXT8 129 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 TRIM67Q6ZTA4 783 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 USP49Q70CQ1 688 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 SV2BQ7L1I2 683 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 KREMEN2Q8NCW0 462 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 SMG7Q92540 1137 aaKnown RBP16.93■□□□□ 0.3
SF3B3-215ENST00000577085 MFSD14AQ96MC6 490 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 USP28Q96RU2 1077 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 ZDHHC7Q9NXF8 308 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 CNTN3Q9P232 1028 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 MYH11P35749 1972 aa16.93■□□□□ 0.3
SF3B3-215ENST00000577085 TMEM221A6NGB7 291 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 M0R296 226 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 ABLIM1O14639 778 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 RFPL2O75678 378 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 CLTAP09496 248 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 RPL9P32969 192 aaKnown RBP16.92■□□□□ 0.3
SF3B3-215ENST00000577085 PPP2R3AQ06190 1150 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 XKR4Q5GH76 650 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 DYMQ7RTS9 669 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 LNX1Q8TBB1 728 aaPredicted RBP16.92■□□□□ 0.3
SF3B3-215ENST00000577085 LRRC15Q8TF66 581 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 PBXIP1Q96AQ6 731 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 ZMAT2Q96NC0 199 aaKnown RBP16.92■□□□□ 0.3
SF3B3-215ENST00000577085 MSTO1Q9BUK6 570 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 PLEKHA5Q9HAU0 1116 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 LIMD1Q9UGP4 676 aa16.92■□□□□ 0.3
SF3B3-215ENST00000577085 I3L4J1 428 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 XPOTO43592 962 aaKnown RBP16.91■□□□□ 0.3
SF3B3-215ENST00000577085 CXCL8P10145 99 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 FGFR3P22607 806 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 GBP2P32456 591 aaPredicted RBP16.91■□□□□ 0.3
SF3B3-215ENST00000577085 SOX4Q06945 474 aaPredicted RBP16.91■□□□□ 0.3
SF3B3-215ENST00000577085 SIGLEC14Q08ET2 396 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 SLC10A6Q3KNW5 377 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
SF3B3-215ENST00000577085 HFE2Q6ZVN8 426 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 ANKS3Q6ZW76 656 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 SUGP1Q8IWZ8 645 aaKnown RBP16.91■□□□□ 0.3
SF3B3-215ENST00000577085 UBALD2Q8IYN6 164 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 ZDHHC14Q8IZN3 488 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
SF3B3-215ENST00000577085 C18orf25Q96B23 403 aaPredicted RBP16.91■□□□□ 0.3
SF3B3-215ENST00000577085 KIF12Q96FN5 646 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 CLSTN3Q9BQT9 956 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 PANK2Q9BZ23 570 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 RPF1Q9H9Y2 349 aaKnown RBP16.91■□□□□ 0.3
SF3B3-215ENST00000577085 SORCS3Q9UPU3 1222 aa16.91■□□□□ 0.3
SF3B3-215ENST00000577085 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.91■□□□□ 0.3
SF3B3-215ENST00000577085 SPTLC2O15270 562 aa16.9■□□□□ 0.3
SF3B3-215ENST00000577085 TKTP29401 623 aaKnown RBP16.9■□□□□ 0.3
SF3B3-215ENST00000577085 NMT1P30419 496 aaKnown RBP16.9■□□□□ 0.3
SF3B3-215ENST00000577085 MCM4P33991 863 aa16.9■□□□□ 0.3
SF3B3-215ENST00000577085 OR1D2P34982 312 aa16.9■□□□□ 0.3
SF3B3-215ENST00000577085 BRCC3P46736 316 aa16.9■□□□□ 0.3
SF3B3-215ENST00000577085 PPM1LQ5SGD2 360 aa16.9■□□□□ 0.3
SF3B3-215ENST00000577085 DDX12PQ92771 950 aa16.9■□□□□ 0.3
SF3B3-215ENST00000577085 FAM122AQ96E09 287 aa16.9■□□□□ 0.3
SF3B3-215ENST00000577085 FAM212AQ96EL1 285 aa16.9■□□□□ 0.3
SF3B3-215ENST00000577085 PRKD2Q9BZL6 878 aa16.9■□□□□ 0.3
SF3B3-215ENST00000577085 MRPL44Q9H9J2 332 aaKnown RBP16.9■□□□□ 0.3
SF3B3-215ENST00000577085 WDR6Q9NNW5 1121 aaKnown RBP16.9■□□□□ 0.3
SF3B3-215ENST00000577085 CDY1Q9Y6F8 540 aa16.9■□□□□ 0.3
SF3B3-215ENST00000577085 H7C4K7 107 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 TULP1O00294 542 aaPredicted RBP16.89■□□□□ 0.29
SF3B3-215ENST00000577085 OGTO15294 1046 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 ZMYND10O75800 440 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 PIGRP01833 764 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 C8AP07357 584 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 IDEP14735 1019 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 GAP43P17677 238 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 NASPP49321 788 aaPredicted RBP16.89■□□□□ 0.29
SF3B3-215ENST00000577085 GTF2BQ00403 316 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 SPAG1Q07617 926 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 ZC2HC1CQ53FD0 456 aaPredicted RBP16.89■□□□□ 0.29
SF3B3-215ENST00000577085 SLFN12LQ6IEE8 588 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms