RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FBXO24O75426 580 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 STAG3L1P0CL83 205 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 FGFR4P22455 802 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 GSTT1P30711 240 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 CIITAP33076 1130 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 PLA2G5P39877 138 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 NRIP1P48552 1158 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 SARSP49591 514 aaKnown RBP7.02□□□□□ -1.29
NUP88-212ENST00000576708 SLC26A2P50443 739 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 CRYBB1P53674 252 aaPredicted RBP7.02□□□□□ -1.29
NUP88-212ENST00000576708 RCAN1P53805 252 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 NLRP5P59047 1200 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 AKAP17AQ02040 695 aaKnown RBP7.02□□□□□ -1.29
NUP88-212ENST00000576708 ZP2Q05996 745 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 ADAM15Q13444 863 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 TOB2Q14106 344 aaPredicted RBP7.02□□□□□ -1.29
NUP88-212ENST00000576708 PRRT3Q5FWE3 981 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 SPOUT1Q5T280 376 aaKnown RBP7.02□□□□□ -1.29
NUP88-212ENST00000576708 ZNF746Q6NUN9 644 aaPredicted RBP7.02□□□□□ -1.29
NUP88-212ENST00000576708 FMR1NBQ8N0W7 255 aaPredicted RBP7.02□□□□□ -1.29
NUP88-212ENST00000576708 C3orf58Q8NDZ4 430 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 FAM122AQ96E09 287 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 CCDC136Q96JN2 1154 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 AIFM3Q96NN9 605 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 SH2D3AQ9BRG2 576 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 AGXT2Q9BYV1 514 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 UNC45AQ9H3U1 944 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 RGS18Q9NS28 235 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 TBC1D22BQ9NU19 505 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 TYW1Q9NV66 732 aaKnown RBP7.02□□□□□ -1.29
NUP88-212ENST00000576708 NOP53Q9NZM5 478 aaKnown RBP7.02□□□□□ -1.29
NUP88-212ENST00000576708 VTI1BQ9UEU0 232 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 RWDD3Q9Y3V2 267 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 SAMM50Q9Y512 469 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 PCDHB7Q9Y5E2 793 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 PCDHA10Q9Y5I2 948 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 COL1A2P08123 1366 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 NID2Q14112 1375 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 BRWD1Q9NSI6 2320 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 DDX3YO15523 660 aaKnown RBP7.01□□□□□ -1.29
NUP88-212ENST00000576708 CSDE1O75534 798 aaKnown RBP7.01□□□□□ -1.29
NUP88-212ENST00000576708 TDP2O95551 362 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 RPLP2P05387 115 aaKnown RBP7.01□□□□□ -1.29
NUP88-212ENST00000576708 IFNAR1P17181 557 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 GNA11P29992 359 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 PBX3P40426 434 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 NDUFV1P49821 464 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 NLRP11P59045 1033 aaKnown RBP7.01□□□□□ -1.29
NUP88-212ENST00000576708 ERVFC1P60507 584 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 FAM189BP81408 668 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 SETQ01105 290 aaPredicted RBP7.01□□□□□ -1.29
NUP88-212ENST00000576708 STK3Q13188 491 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 DRP2Q13474 957 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 EFCAB12Q6NXP0 572 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 SHISA2Q6UWI4 295 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 LRRC55Q6ZSA7 311 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 SLC24A5Q71RS6 500 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 TEX2Q8IWB9 1127 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 LINC01465Q8N7H1 131 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 RNF169Q8NCN4 708 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 TBCKQ8TEA7 893 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 CCDC12Q8WUD4 166 aaPredicted RBP7.01□□□□□ -1.29
NUP88-212ENST00000576708 SLC5A5Q92911 643 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 P2RX5Q93086 422 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 KLHDC7BQ96G42 594 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 FRMD6Q96NE9 622 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 RNF26Q9BY78 433 aaPredicted RBP7.01□□□□□ -1.29
NUP88-212ENST00000576708 UPF3BQ9BZI7 483 aaKnown RBP7.01□□□□□ -1.29
NUP88-212ENST00000576708 ADAMTS10Q9H324 1103 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 CWH43Q9H720 699 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 DISC1Q9NRI5 854 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 CLEC1BQ9P126 229 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 FAM8A1Q9UBU6 413 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 TCEAL9Q9UHQ7 104 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 CD207Q9UJ71 328 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 BARX2Q9UMQ3 279 aaPredicted RBP7.01□□□□□ -1.29
NUP88-212ENST00000576708 AKT3Q9Y243 479 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 MYO7AQ13402 2215 aa7.01□□□□□ -1.29
NUP88-212ENST00000576708 PLXNA4Q9HCM2 1894 aa7□□□□□ -1.29
NUP88-212ENST00000576708 WDR64B1ANS9 1081 aa7□□□□□ -1.29
NUP88-212ENST00000576708 DCXO43602 365 aa7□□□□□ -1.29
NUP88-212ENST00000576708 NCK2O43639 380 aa7□□□□□ -1.29
NUP88-212ENST00000576708 GAS7O60861 476 aa7□□□□□ -1.29
NUP88-212ENST00000576708 FGF18O76093 207 aa7□□□□□ -1.29
NUP88-212ENST00000576708 STBD1O95210 358 aa7□□□□□ -1.29
NUP88-212ENST00000576708 GLP2RO95838 553 aa7□□□□□ -1.29
NUP88-212ENST00000576708 PSMA5P28066 241 aa7□□□□□ -1.29
NUP88-212ENST00000576708 EVCP57679 992 aa7□□□□□ -1.29
NUP88-212ENST00000576708 PRKCEQ02156 737 aa7□□□□□ -1.29
NUP88-212ENST00000576708 GSTM4Q03013 218 aa7□□□□□ -1.29
NUP88-212ENST00000576708 SSRP1Q08945 709 aaKnown RBP7□□□□□ -1.29
NUP88-212ENST00000576708 SMAD4Q13485 552 aaKnown RBP7□□□□□ -1.29
NUP88-212ENST00000576708 NPY5RQ15761 445 aa7□□□□□ -1.29
NUP88-212ENST00000576708 SMAD2Q15796 467 aaKnown RBP7□□□□□ -1.29
NUP88-212ENST00000576708 LONRF3Q496Y0 759 aa7□□□□□ -1.29
NUP88-212ENST00000576708 NAALADL2Q58DX5 795 aa7□□□□□ -1.29
NUP88-212ENST00000576708 LRCH2Q5VUJ6 765 aa7□□□□□ -1.29
NUP88-212ENST00000576708 MCTP2Q6DN12 878 aa7□□□□□ -1.29
NUP88-212ENST00000576708 RUFY3Q7L099 469 aa7□□□□□ -1.29
NUP88-212ENST00000576708 ADHFE1Q8IWW8 467 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms