RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 HOXA2O43364 376 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 SKIP12755 728 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 CASP4P49662 377 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 CLCNKBP51801 687 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 CDR1P51861 262 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 GRIK3Q13003 919 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 BMT2Q1RMZ1 405 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 PLPP4Q5VZY2 271 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 JADE1Q6IE81 842 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 ARMCX5Q6P1M9 558 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 CD300LGQ6UXG3 332 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 ALKAL1Q6UXT8 129 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 RDH13Q8NBN7 331 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 SPPL3Q8TCT6 385 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 POF1BQ8WVV4 589 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 HVCN1Q96D96 273 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 ZNF558Q96NG5 402 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 ACAP3Q96P50 834 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 PYM1Q9BRP8 204 aaKnown RBP8.61□□□□□ -1.03
CCDC40-215ENST00000576033 CCDC94Q9BW85 323 aaPredicted RBP8.61□□□□□ -1.03
CCDC40-215ENST00000576033 LRRC27Q9C0I9 530 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 HSPBP1Q9NZL4 362 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 CNTN3Q9P232 1028 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 AGO2Q9UKV8 859 aaKnown RBP8.61□□□□□ -1.03
CCDC40-215ENST00000576033 PCDHB13Q9Y5F0 798 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 UBE4BO95155 1302 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 TTC26A0AVF1 554 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 CCDC192P0DO97 292 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 LAG3P18627 525 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 PRCPP42785 496 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 BRCC3P46736 316 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 TYRO3Q06418 890 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 XKR4Q5GH76 650 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 GPR153Q6NV75 609 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 RBM23Q86U06 439 aaKnown RBP8.6□□□□□ -1.03
CCDC40-215ENST00000576033 VN1R2Q8NFZ6 395 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 SPATA20Q8TB22 786 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 SMARCE1Q969G3 411 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 KIF12Q96FN5 646 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 IGSF21Q96ID5 467 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 POP1Q99575 1024 aaKnown RBP8.6□□□□□ -1.03
CCDC40-215ENST00000576033 MRPL9Q9BYD2 267 aaKnown RBP8.6□□□□□ -1.03
CCDC40-215ENST00000576033 GPR62Q9BZJ7 368 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 PDE11AQ9HCR9 933 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 CDH22Q9UJ99 828 aa8.6□□□□□ -1.03
CCDC40-215ENST00000576033 C2CD2LO14523 706 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 PER2O15055 1255 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 SPTLC1O15269 473 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 CAVIN2O95810 425 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 THP07101 528 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 CLTAP09496 248 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 RPL17P18621 184 aaKnown RBP8.59□□□□□ -1.03
CCDC40-215ENST00000576033 CA8P35219 290 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 YARSP54577 528 aaKnown RBP8.59□□□□□ -1.03
CCDC40-215ENST00000576033 STX17P56962 302 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 DLG4P78352 724 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 PPP2R3AQ06190 1150 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 TUSC3Q13454 348 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 MORC3Q14149 939 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 HSP90AA2PQ14568 343 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-215ENST00000576033 KCNB1Q14721 858 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 KNOP1Q1ED39 458 aaKnown RBP8.59□□□□□ -1.03
CCDC40-215ENST00000576033 ZCWPW2Q504Y3 356 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 TCEAL5Q5H9L2 206 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 RTP2Q5QGT7 225 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 KLHL10Q6JEL2 608 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 POTEHQ6S545 545 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 BRSK2Q8IWQ3 736 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 HACE1Q8IYU2 909 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 GPD1LQ8N335 351 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 OR5B17Q8NGF7 314 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 MAFAQ8NHW3 353 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-215ENST00000576033 FAM200AQ8TCP9 573 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 FAM193BQ96PV7 902 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-215ENST00000576033 MED15Q96RN5 788 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 GAS2L1Q99501 681 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-215ENST00000576033 TCF25Q9BQ70 676 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 C11orf84Q9BUA3 381 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-215ENST00000576033 MTMR12Q9C0I1 747 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 ZBP1Q9H171 429 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 RPF1Q9H9Y2 349 aaKnown RBP8.59□□□□□ -1.03
CCDC40-215ENST00000576033 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC40-215ENST00000576033 RBAKQ9NYW8 714 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-215ENST00000576033 SPG21Q9NZD8 308 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 EXOC7Q9UPT5 735 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 CTNND2Q9UQB3 1225 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 C2orf16Q68DN1 1984 aa8.59□□□□□ -1.03
CCDC40-215ENST00000576033 PPP1R3GB7ZBB8 358 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 PODXLO00592 558 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 FSCN2O14926 492 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 ADAM12O43184 909 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 HCRTO43612 131 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 EXTL3O43909 919 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 GLP2RO95838 553 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 EFEMP2O95967 443 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 NR3C1P04150 777 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 MYL1P05976 194 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 TRIM49P0CI25 452 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 TRIM49CP0CI26 452 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 KCNE1P15382 129 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms