RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 RAB30Q15771 203 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 ZBTB6Q15916 424 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 CT47A1Q5JQC4 288 aaPredicted RBP9.3□□□□□ -0.92
NUP88-211ENST00000575976 JADE1Q6IE81 842 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 FOXR2Q6PJQ5 311 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 ZNF280BQ86YH2 543 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 CD302Q8IX05 232 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 LRRC43Q8N309 656 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 TMEM130Q8N3G9 435 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 FIBCD1Q8N539 461 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 CSGALNACT2Q8N6G5 542 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 PLEKHO2Q8TD55 490 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 RSPH1Q8WYR4 309 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 KIF12Q96FN5 646 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 PPP1R10Q96QC0 940 aaKnown RBP9.3□□□□□ -0.92
NUP88-211ENST00000575976 SRRTQ9BXP5 876 aaKnown RBP9.3□□□□□ -0.92
NUP88-211ENST00000575976 MRPL9Q9BYD2 267 aaKnown RBP9.3□□□□□ -0.92
NUP88-211ENST00000575976 GZF1Q9H116 711 aaPredicted RBP9.3□□□□□ -0.92
NUP88-211ENST00000575976 DNAJC25Q9H1X3 360 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 ASB7Q9H672 318 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 CWH43Q9H720 699 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 PDE11AQ9HCR9 933 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 MSRAQ9UJ68 235 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 FRMD4BQ9Y2L6 1034 aa9.3□□□□□ -0.92
NUP88-211ENST00000575976 MRPL42Q9Y6G3 142 aaKnown RBP9.3□□□□□ -0.92
NUP88-211ENST00000575976 LINC01553A4QN01 128 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 MAPK13O15264 365 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 IL18RAPO95256 599 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 NFICP08651 508 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 LINC00271P0C7V0 271 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 CCDC192P0DO97 292 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 FOSL2P15408 326 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 DNAJB2P25686 324 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 TAP1Q03518 808 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 SOX4Q06945 474 aaPredicted RBP9.29□□□□□ -0.92
NUP88-211ENST00000575976 GRIK3Q13003 919 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 HSP90AA2PQ14568 343 aaPredicted RBP9.29□□□□□ -0.92
NUP88-211ENST00000575976 PSMD6Q15008 389 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 SURF1Q15526 300 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 ANO6Q4KMQ2 910 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 SPOUT1Q5T280 376 aaKnown RBP9.29□□□□□ -0.92
NUP88-211ENST00000575976 SPRED2Q7Z698 418 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 FILIP1Q7Z7B0 1213 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 HOMEZQ8IX15 550 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 EFCAB13Q8IY85 973 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 COLGALT2Q8IYK4 626 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 FAM186BQ8IYM0 893 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 ENOX1Q8TC92 643 aaKnown RBP9.29□□□□□ -0.92
NUP88-211ENST00000575976 C18orf25Q96B23 403 aaPredicted RBP9.29□□□□□ -0.92
NUP88-211ENST00000575976 CCDC127Q96BQ5 260 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 BORCS6Q96GS4 357 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 FAM84AQ96KN4 292 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 MFSD14AQ96MC6 490 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 CEP63Q96MT8 703 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 FAM193BQ96PV7 902 aaPredicted RBP9.29□□□□□ -0.92
NUP88-211ENST00000575976 POP1Q99575 1024 aaKnown RBP9.29□□□□□ -0.92
NUP88-211ENST00000575976 MKNK1Q9BUB5 465 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 GOLGA2P5Q9HBQ8 144 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 CACNG4Q9UBN1 327 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 DNAJB4Q9UDY4 337 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 TUBGCP4Q9UGJ1 667 aa9.29□□□□□ -0.92
NUP88-211ENST00000575976 FNDC1Q4ZHG4 1894 aaPredicted RBP9.28□□□□□ -0.92
NUP88-211ENST00000575976 TMEM265A0A087WTH1 108 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 CASTOR2A6NHX0 329 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 LRRIQ3A6PVS8 624 aaPredicted RBP9.28□□□□□ -0.92
NUP88-211ENST00000575976 NT5C1B-RDH14C9J2C7 533 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 SLC16A3O15427 465 aaKnown RBP9.28□□□□□ -0.92
NUP88-211ENST00000575976 ZC3H11AO75152 810 aaKnown RBP eCLIP9.28□□□□□ -0.92
NUP88-211ENST00000575976 GALTP07902 379 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 DLATP10515 647 aaKnown RBP9.28□□□□□ -0.92
NUP88-211ENST00000575976 EPB41P11171 864 aaKnown RBP9.28□□□□□ -0.92
NUP88-211ENST00000575976 PBX3P40426 434 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 OR1G1P47890 313 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 SLC11A1P49279 550 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 VAMP7P51809 220 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 GUCY2FP51841 1108 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 BCAR1P56945 870 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 DLG4P78352 724 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 DSC1Q08554 894 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 TUSC3Q13454 348 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 TMEM132DQ14C87 1099 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 TPD52L1Q16890 204 aaPredicted RBP9.28□□□□□ -0.92
NUP88-211ENST00000575976 SPATA1Q5VX52 437 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 LMBRD2Q68DH5 695 aaPredicted RBP9.28□□□□□ -0.92
NUP88-211ENST00000575976 COLGALT1Q8NBJ5 622 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 OR5B17Q8NGF7 314 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 TMC2Q8TDI7 906 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 PARD3BQ8TEW8 1205 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 ZNF516Q92618 1163 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 RABGGTAQ92696 567 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 CLP1Q92989 425 aaKnown RBP9.28□□□□□ -0.92
NUP88-211ENST00000575976 TIFAQ96CG3 184 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 FNBP1Q96RU3 617 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 TSPAN18Q96SJ8 248 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 PAAF1Q9BRP4 392 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 TMEM175Q9BSA9 504 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 C17orf80Q9BSJ5 609 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 SLC38A7Q9NVC3 462 aa9.28□□□□□ -0.92
NUP88-211ENST00000575976 UBQLN1Q9UMX0 589 aaKnown RBP9.28□□□□□ -0.92
NUP88-211ENST00000575976 DERAQ9Y315 318 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms