RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	GRXCR2	A6NFK2	248 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	ANKRD63	C9JTQ0	380 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	LILRB3	O75022	631 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	CXCL8	P10145	99 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	MYB	P10242	640 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	CASP5	P51878	434 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	POU5F1	Q01860	360 aa	Known RBP	27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	CREM	Q03060	361 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	SMAD4	Q13485	552 aa	Known RBP	27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	UPP1	Q16831	310 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	DCLRE1A	Q6PJP8	1040 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	UNC13D	Q70J99	1090 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	CD302	Q8IX05	232 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	VN1R2	Q8NFZ6	395 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	RABGGTA	Q92696	567 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	ZMAT2	Q96NC0	199 aa	Known RBP	27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	GPR62	Q9BZJ7	368 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	RPF1	Q9H9Y2	349 aa	Known RBP	27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	CACNG4	Q9UBN1	327 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	BARX2	Q9UMQ3	279 aa	Predicted RBP	27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	HCFC2	Q9Y5Z7	792 aa		27.58	■■■□□ 2.01
SRRM2-223	ENST00000575701	PVALEF	A0A1B0GWK0	134 aa		27.57	■■■□□ 2
SRRM2-223	ENST00000575701	TTC26	A0AVF1	554 aa		27.57	■■■□□ 2
SRRM2-223	ENST00000575701	ACTN4	O43707	911 aa	Known RBP	27.57	■■■□□ 2
SRRM2-223	ENST00000575701	KIAA0319	Q5VV43	1072 aa		27.57	■■■□□ 2
SRRM2-223	ENST00000575701	SYCP3	Q8IZU3	236 aa		27.57	■■■□□ 2
SRRM2-223	ENST00000575701	SERTAD1	Q9UHV2	236 aa		27.57	■■■□□ 2
SRRM2-223	ENST00000575701	CPSF3	Q9UKF6	684 aa	Known RBP	27.57	■■■□□ 2
SRRM2-223	ENST00000575701	AGO2	Q9UKV8	859 aa	Known RBP	27.57	■■■□□ 2
SRRM2-223	ENST00000575701	DLL1	O00548	723 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	EIF3D	O15371	548 aa	Known RBP eCLIP	27.56	■■■□□ 2
SRRM2-223	ENST00000575701	MEFV	O15553	781 aa	Predicted RBP	27.56	■■■□□ 2
SRRM2-223	ENST00000575701	XPOT	O43592	962 aa	Known RBP	27.56	■■■□□ 2
SRRM2-223	ENST00000575701	B3GAT3	O94766	335 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	MYL1	P05976	194 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	HOXB8	P17481	243 aa	Predicted RBP	27.56	■■■□□ 2
SRRM2-223	ENST00000575701	RPL9	P32969	192 aa	Known RBP	27.56	■■■□□ 2
SRRM2-223	ENST00000575701	TNFSF9	P41273	254 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	SYK	P43405	635 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	CLCNKB	P51801	687 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	FAM26F	Q5R3K3	315 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	TAS1R1	Q7RTX1	841 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	SMRP1	Q8NCR6	262 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	HASPIN	Q8TF76	798 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	POMGNT1	Q8WZA1	660 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	KLHL5	Q96PQ7	755 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	UHRF1	Q96T88	793 aa	Predicted RBP	27.56	■■■□□ 2
SRRM2-223	ENST00000575701	RXFP1	Q9HBX9	757 aa		27.56	■■■□□ 2
SRRM2-223	ENST00000575701	CIZ1	Q9ULV3	898 aa	Predicted RBP	27.56	■■■□□ 2
SRRM2-223	ENST00000575701	TRAPPC3	O43617	180 aa		27.55	■■■□□ 2
SRRM2-223	ENST00000575701	ADH1A	P07327	375 aa		27.55	■■■□□ 2
SRRM2-223	ENST00000575701	ADRB2	P07550	413 aa		27.55	■■■□□ 2
SRRM2-223	ENST00000575701	CNP	P09543	421 aa	Known RBP	27.55	■■■□□ 2
SRRM2-223	ENST00000575701	AFM	P43652	599 aa		27.55	■■■□□ 2
SRRM2-223	ENST00000575701	SOX4	Q06945	474 aa	Predicted RBP	27.55	■■■□□ 2
SRRM2-223	ENST00000575701	KCNA1	Q09470	495 aa		27.55	■■■□□ 2
SRRM2-223	ENST00000575701	ENOX2	Q16206	610 aa	Known RBP	27.55	■■■□□ 2
SRRM2-223	ENST00000575701	ANKRD54	Q6NXT1	300 aa		27.55	■■■□□ 2
SRRM2-223	ENST00000575701	LLGL2	Q6P1M3	1020 aa		27.55	■■■□□ 2
SRRM2-223	ENST00000575701	FGFBP2	Q9BYJ0	223 aa		27.55	■■■□□ 2
SRRM2-223	ENST00000575701	GOLGA2P5	Q9HBQ8	144 aa		27.55	■■■□□ 2
SRRM2-223	ENST00000575701	DZANK1	Q9NVP4	752 aa		27.55	■■■□□ 2
SRRM2-223	ENST00000575701	C2CD2L	O14523	706 aa		27.54	■■■□□ 2
SRRM2-223	ENST00000575701	MBTPS2	O43462	519 aa		27.54	■■■□□ 2
SRRM2-223	ENST00000575701	UBE4B	O95155	1302 aa		27.54	■■■□□ 2
SRRM2-223	ENST00000575701	GART	P22102	1010 aa		27.54	■■■□□ 2
SRRM2-223	ENST00000575701	RBM10	P98175	930 aa	Known RBP	27.54	■■■□□ 2
SRRM2-223	ENST00000575701	CLUL1	Q15846	466 aa		27.54	■■■□□ 2
SRRM2-223	ENST00000575701	ZBTB41	Q5SVQ8	909 aa		27.54	■■■□□ 2
SRRM2-223	ENST00000575701	PDXDC1	Q6P996	788 aa		27.54	■■■□□ 2
SRRM2-223	ENST00000575701	TTPAL	Q9BTX7	342 aa		27.54	■■■□□ 2
SRRM2-223	ENST00000575701	BLZF1	Q9H2G9	400 aa		27.54	■■■□□ 2
SRRM2-223	ENST00000575701	FNIP2	Q9P278	1114 aa		27.54	■■■□□ 2
SRRM2-223	ENST00000575701	UBQLN1	Q9UMX0	589 aa	Known RBP	27.54	■■■□□ 2
SRRM2-223	ENST00000575701	TISP43	B9A030	160 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	PODXL	O00592	558 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	C1R	P00736	705 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	IL9	P15248	144 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	CYP3A5	P20815	502 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	KLRC2	P26717	231 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	NDUFA8	P51970	172 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	EHHADH	Q08426	723 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	CUL4B	Q13620	913 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	SMAD2	Q15796	467 aa	Known RBP	27.53	■■■□□ 2
SRRM2-223	ENST00000575701	TPRN	Q4KMQ1	711 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	FAM171A1	Q5VUB5	890 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	27.53	■■■□□ 2
SRRM2-223	ENST00000575701	FSIP1	Q8NA03	581 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	SLC22A17	Q8WUG5	538 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	KIF12	Q96FN5	646 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	PAGE5	Q96GU1	130 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	GDPD2	Q9HCC8	539 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	PRKAG3	Q9UGI9	489 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	DERA	Q9Y315	318 aa		27.53	■■■□□ 2
SRRM2-223	ENST00000575701	TCF20	Q9UGU0	1960 aa	Known RBP	27.53	■■■□□ 2
SRRM2-223	ENST00000575701	LACTBL1	A8MY62	500 aa		27.52	■■■□□ 2
SRRM2-223	ENST00000575701	KIAA0391	O15091	583 aa	Known RBP	27.52	■■■□□ 2
SRRM2-223	ENST00000575701	PRPF6	O94906	941 aa	Known RBP	27.52	■■■□□ 2
SRRM2-223	ENST00000575701	LDHA	P00338	332 aa	Known RBP	27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms