RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 DIS3Q9Y2L1 958 aaKnown RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 DNAH12Q6ZR08 3092 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 ABCB11O95342 1321 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 TBCAO75347 108 aaKnown RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 THOC5Q13769 683 aaKnown RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 RBM26Q5T8P6 1007 aaKnown RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 SLF2Q8IX21 1173 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 C4orf33Q8N1A6 199 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 RAD54LQ92698 747 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 TDRD3Q9H7E2 651 aaKnown RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 SLCO1B3Q9NPD5 702 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 PCMTD2Q9NV79 361 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 ZNF711Q9Y462 761 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 FAM47DPA6NHR8 397 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 CTTNQ14247 550 aaKnown RBP10.18□□□□□ -0.78
CCDC40-212ENST00000574799 KPNB1Q14974 876 aaKnown RBP10.18□□□□□ -0.78
CCDC40-212ENST00000574799 MTFR1Q15390 333 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 TRMT10CQ7L0Y3 403 aaKnown RBP10.18□□□□□ -0.78
CCDC40-212ENST00000574799 LCA5Q86VQ0 697 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 NME8Q8N427 588 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 LENG9Q96B70 501 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 SERPINB12Q96P63 405 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 PREBQ9HCU5 417 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 GPCPD1Q9NPB8 672 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 PFASO15067 1338 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 MAP3K13O43283 966 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 TJP3O95049 919 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 GJB6O95452 261 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 KLRC3Q07444 240 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 PARP6Q2NL67 630 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 GALNTL6Q49A17 601 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 ASPRV1Q53RT3 343 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 RNF43Q68DV7 783 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 SDCCAG8Q86SQ7 713 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-212ENST00000574799 CCDC125Q86Z20 511 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 SYT2Q8N9I0 419 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-212ENST00000574799 RDH13Q8NBN7 331 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 LRMDAQ9H2I8 198 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 ARHGAP42A6NI28 874 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 H0YIN7 160 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 CCDC22O60826 627 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 CDH16O75309 829 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 GCNT3O95395 438 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 DLATP10515 647 aaKnown RBP10.18□□□□□ -0.78
CCDC40-212ENST00000574799 SKIV2L2P42285 1042 aaKnown RBP10.18□□□□□ -0.78
CCDC40-212ENST00000574799 CPA2P48052 419 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 SPIRE1Q08AE8 756 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 SGSM1Q2NKQ1 1148 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 KHDC1Q4VXA5 237 aaKnown RBP10.18□□□□□ -0.78
CCDC40-212ENST00000574799 ZCWPW2Q504Y3 356 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 SPDYCQ5MJ68 293 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 DEFB132Q7Z7B7 95 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 MTDHQ86UE4 582 aaKnown RBP10.18□□□□□ -0.78
CCDC40-212ENST00000574799 SPATA24Q86W54 205 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 LRRC57Q8N9N7 239 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 ATP8B4Q8TF62 1192 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 OLFM3Q96PB7 478 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 ALG13Q9NP73 1137 aaKnown RBP10.18□□□□□ -0.78
CCDC40-212ENST00000574799 ALG6Q9Y672 507 aa10.18□□□□□ -0.78
CCDC40-212ENST00000574799 NPHP3-ACAD11A0A0J9YXS1 232 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 E9PMD0 336 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 HNRNPRO43390 633 aaKnown RBP10.17□□□□□ -0.78
CCDC40-212ENST00000574799 CALUO43852 315 aaPredicted RBP10.17□□□□□ -0.78
CCDC40-212ENST00000574799 EGFRP00533 1210 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 PTPN4P29074 926 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 KRT17Q04695 432 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 OVGP1Q12889 678 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 EAPPQ56P03 285 aaPredicted RBP10.17□□□□□ -0.78
CCDC40-212ENST00000574799 NLRP9Q7RTR0 991 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 MAP7D3Q8IWC1 876 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 TYW1Q9NV66 732 aaKnown RBP10.17□□□□□ -0.78
CCDC40-212ENST00000574799 DNAAF2Q9NVR5 837 aaKnown RBP10.17□□□□□ -0.78
CCDC40-212ENST00000574799 ATXN10Q9UBB4 475 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 PCDHA12Q9UN75 941 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 SNAP25P60880 206 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 SLC34A1Q06495 639 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 UBAP2Q5T6F2 1119 aaKnown RBP10.17□□□□□ -0.78
CCDC40-212ENST00000574799 ZNF746Q6NUN9 644 aaPredicted RBP10.17□□□□□ -0.78
CCDC40-212ENST00000574799 IZUMO2Q6UXV1 221 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 ARHGAP27Q6ZUM4 889 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 TRIM59Q8IWR1 403 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 CNKSR2Q8WXI2 1034 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 MBOAT7Q96N66 472 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 FGFBP2Q9BYJ0 223 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 MIS12Q9H081 205 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 NDE1Q9NXR1 346 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 SLC4A7Q9Y6M7 1214 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 RPTORQ8N122 1335 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 PNMA6FA0A0J9YX94 578 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 GDF11O95390 407 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 PGM1P36871 562 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 TRIM42Q8IWZ5 723 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 INPP5DQ92835 1189 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 FAM192AQ9GZU8 254 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 CCDC134Q9H6E4 229 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 ZNF287Q9HBT7 754 aa10.17□□□□□ -0.78
CCDC40-212ENST00000574799 DDX3XO00571 662 aaKnown RBP eCLIP10.16□□□□□ -0.78
CCDC40-212ENST00000574799 VIL1P09327 827 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms