RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 PRSS55Q6UWB4 352 aaPredicted RBP10.95□□□□□ -0.66
RPA1-206ENST00000573994 USP49Q70CQ1 688 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 APBB1IPQ7Z5R6 666 aaPredicted RBP10.95□□□□□ -0.66
RPA1-206ENST00000573994 PPFIBP1Q86W92 1011 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 TMEM161BQ8NDZ6 487 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 SPIRE2Q8WWL2 714 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 RIN2Q8WYP3 895 aaPredicted RBP10.95□□□□□ -0.66
RPA1-206ENST00000573994 RAD54LQ92698 747 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 CLIC6Q96NY7 704 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 TMEM134Q9H6X4 195 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 SFXN1Q9H9B4 322 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 C17orf75Q9HAS0 396 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 GOLGA2P5Q9HBQ8 144 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 MAN1C1Q9NR34 630 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 BLOC1S4Q9NUP1 217 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 GTF3C3Q9Y5Q9 886 aa10.95□□□□□ -0.66
RPA1-206ENST00000573994 C2CD4DB7Z1M9 353 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 K7ENM7 598 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 ABLIM1O14639 778 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 GLUD1P00367 558 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 KRT18P05783 430 aaKnown RBP10.94□□□□□ -0.66
RPA1-206ENST00000573994 ADH1AP07327 375 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 SPATA31D3P0C874 917 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 PROZP22891 400 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 IGFBP6P24592 240 aaPredicted RBP10.94□□□□□ -0.66
RPA1-206ENST00000573994 GRM5P41594 1212 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 ITIH3Q06033 890 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 STRN3Q13033 797 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 NOLC1Q14978 699 aaKnown RBP eCLIP10.94□□□□□ -0.66
RPA1-206ENST00000573994 USP41Q3LFD5 358 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 SEZ6Q53EL9 994 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 HERC4Q5GLZ8 1057 aaPredicted RBP10.94□□□□□ -0.66
RPA1-206ENST00000573994 RTP2Q5QGT7 225 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 FOXD4L5Q5VV16 416 aaPredicted RBP10.94□□□□□ -0.66
RPA1-206ENST00000573994 MPZL3Q6UWV2 235 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 SPATA31D4Q6ZUB0 917 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 PALB2Q86YC2 1186 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 FOXD4L4Q8WXT5 416 aaPredicted RBP10.94□□□□□ -0.66
RPA1-206ENST00000573994 BICD1Q96G01 975 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 INTS4Q96HW7 963 aaKnown RBP10.94□□□□□ -0.66
RPA1-206ENST00000573994 EPSTI1Q96J88 318 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 ZBTB45Q96K62 511 aaPredicted RBP10.94□□□□□ -0.66
RPA1-206ENST00000573994 SNX27Q96L92 541 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 RIPOR3Q96MK2 946 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 PPP1R10Q96QC0 940 aaKnown RBP10.94□□□□□ -0.66
RPA1-206ENST00000573994 TCHPQ9BT92 498 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 CCDC94Q9BW85 323 aaPredicted RBP10.94□□□□□ -0.66
RPA1-206ENST00000573994 ZHX3Q9H4I2 956 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 PTPRHQ9HD43 1115 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 KCND2Q9NZV8 630 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 FBXO2Q9UK22 296 aaPredicted RBP10.94□□□□□ -0.66
RPA1-206ENST00000573994 SSX2IPQ9Y2D8 614 aa10.94□□□□□ -0.66
RPA1-206ENST00000573994 RBM19Q9Y4C8 960 aaKnown RBP10.94□□□□□ -0.66
RPA1-206ENST00000573994 MEFVO15553 781 aaPredicted RBP10.93□□□□□ -0.66
RPA1-206ENST00000573994 STX6O43752 255 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 GPR37L1O60883 481 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 TBCAO75347 108 aaKnown RBP10.93□□□□□ -0.66
RPA1-206ENST00000573994 FAM13AO94988 1023 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 MCF2P10911 925 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 PDIA4P13667 645 aaKnown RBP10.93□□□□□ -0.66
RPA1-206ENST00000573994 SCP2P22307 547 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 MTHFRP42898 656 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 MATR3P43243 847 aaKnown RBP eCLIP10.93□□□□□ -0.66
RPA1-206ENST00000573994 SMTNP53814 917 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 YARSP54577 528 aaKnown RBP10.93□□□□□ -0.66
RPA1-206ENST00000573994 NCKAP1LP55160 1127 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 SOX4Q06945 474 aaPredicted RBP10.93□□□□□ -0.66
RPA1-206ENST00000573994 FAM171A1Q5VUB5 890 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 CEP57Q86XR8 500 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 HSCBQ8IWL3 235 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 GPR65Q8IYL9 337 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 TMEM130Q8N3G9 435 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 MYCT1Q8N699 235 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 TDRD5Q8NAT2 981 aaKnown RBP10.93□□□□□ -0.66
RPA1-206ENST00000573994 LARP4BQ92615 738 aaKnown RBP10.93□□□□□ -0.66
RPA1-206ENST00000573994 ZMAT2Q96NC0 199 aaKnown RBP10.93□□□□□ -0.66
RPA1-206ENST00000573994 NECTIN4Q96NY8 510 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 RXFP1Q9HBX9 757 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 TOPORSQ9NS56 1045 aaPredicted RBP10.93□□□□□ -0.66
RPA1-206ENST00000573994 CHST7Q9NS84 486 aa10.93□□□□□ -0.66
RPA1-206ENST00000573994 TSR3Q9UJK0 312 aaKnown RBP10.93□□□□□ -0.66
RPA1-206ENST00000573994 SMIM28A0A1B0GU29 152 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 I3L4J1 428 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 TOM1L1O75674 476 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 RFPL2O75678 378 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 B3GAT3O94766 335 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 C1RP00736 705 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 CLCNKBP51801 687 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 PSMD5Q16401 504 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 ATAT1Q5SQI0 421 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 C3orf58Q8NDZ4 430 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 C18orf25Q96B23 403 aaPredicted RBP10.92□□□□□ -0.66
RPA1-206ENST00000573994 NTPCRQ9BSD7 190 aaKnown RBP10.92□□□□□ -0.66
RPA1-206ENST00000573994 TTPALQ9BTX7 342 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 PARVGQ9HBI0 331 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 LARSQ9P2J5 1176 aaKnown RBP10.92□□□□□ -0.66
RPA1-206ENST00000573994 DPP7Q9UHL4 492 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 ODF2LQ9ULJ1 636 aa10.92□□□□□ -0.66
RPA1-206ENST00000573994 NR2E1Q9Y466 385 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms