RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 PFDN1O60925 122 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 F2P00734 622 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 CFBP00751 764 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 PAEPP09466 180 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 PDGFRBP09619 1106 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 TROVE2P10155 538 aaKnown RBP eCLIP6.93□□□□□ -1.3
PRPF8-209ENST00000573725 NAT2P11245 290 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 ACADSP16219 412 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 GNAZP19086 355 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 DRD4P21917 467 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 HOXA13P31271 388 aaPredicted RBP6.93□□□□□ -1.3
PRPF8-209ENST00000573725 RFC5P40937 340 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 ADKP55263 362 aaKnown RBP6.93□□□□□ -1.3
PRPF8-209ENST00000573725 SP2Q02086 613 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 GUCY1B3Q02153 619 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 GHRHRQ02643 423 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 GSTM4Q03013 218 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 LMNB2Q03252 620 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 KLC1Q07866 573 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 ITGB3BPQ13352 177 aaPredicted RBP6.93□□□□□ -1.3
PRPF8-209ENST00000573725 LSAMPQ13449 338 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 LAMC2Q13753 1193 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 MFSD10Q14728 455 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 KRT72Q14CN4 511 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 SEC23AQ15436 765 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 AAK1Q2M2I8 961 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 SMUG1Q53HV7 270 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 SH2D4BQ5SQS7 431 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 ZNF618Q5T7W0 954 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 IRGCQ6NXR0 463 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 TMEM53Q6P2H8 277 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 CNKSR3Q6P9H4 555 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 EMBQ6PCB8 327 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 STOX1Q6ZVD7 989 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 CACNA2D4Q7Z3S7 1137 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 NANOGNBQ7Z5D8 188 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 LRRC43Q8N309 656 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 ARHGAP18Q8N392 663 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 MMGT1Q8N4V1 131 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 C7orf31Q8N865 590 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 ANKK1Q8NFD2 765 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 IL31RAQ8NI17 732 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 GPKOWQ92917 476 aaPredicted RBP eCLIP6.93□□□□□ -1.3
PRPF8-209ENST00000573725 RNF25Q96BH1 459 aaPredicted RBP6.93□□□□□ -1.3
PRPF8-209ENST00000573725 NR1H4Q96RI1 486 aaPredicted RBP6.93□□□□□ -1.3
PRPF8-209ENST00000573725 RPS6KC1Q96S38 1066 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 MMS19Q96T76 1030 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 PDCD2LQ9BRP1 358 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 TIPINQ9BVW5 301 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 CARD9Q9H257 536 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 BCAS3Q9H6U6 928 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 UBAP1Q9NZ09 502 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 MAD2L2Q9UI95 211 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 COG5Q9UP83 839 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 SPO11Q9Y5K1 396 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 N6AMT1Q9Y5N5 214 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 STK24Q9Y6E0 443 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 TECTAO75443 2155 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 ABHD14A-ACY1A0A1B0GW23 586 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 LINC01553A4QN01 128 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 TMEM247A6NEH6 219 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 EIF4E1BA6NMX2 242 aaKnown RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 AKR1B15C9JRZ8 316 aaPredicted RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 KLRF2D3W0D1 207 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 E7ENQ6 273 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 IFIT3O14879 490 aaKnown RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 LSM1O15116 133 aaKnown RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 P4HA2O15460 535 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 SORBS3O60504 671 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 SUPT3HO75486 399 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 ZMYND10O75800 440 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 GJB5O95377 273 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 PARNO95453 639 aaKnown RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 GGPS1O95749 300 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 MYCLP12524 364 aaPredicted RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 VARSP26640 1264 aaKnown RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 SMARCA1P28370 1054 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 NT5C2P49902 561 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 NEK2P51955 445 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 SH3BGRP55822 239 aaPredicted RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 PTK7Q13308 1070 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 ITIH4Q14624 930 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 PGM5Q15124 567 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 IMMTQ16891 758 aaKnown RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 HSDL1Q3SXM5 330 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 CELF3Q5SZQ8 465 aaKnown RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 RNF220Q5VTB9 566 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 SPECC1LQ69YQ0 1117 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 THOC7Q6I9Y2 204 aaKnown RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 CCDC70Q6NSX1 233 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 FAM117BQ6P1L5 589 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 CEP128Q6ZU80 1094 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 CYB5R4Q7L1T6 521 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 TBC1D1Q86TI0 1168 aaPredicted RBP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 SERINC5Q86VE9 423 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 VSIG10LQ86VR7 867 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 MREGQ8N565 214 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 DEPTORQ8TB45 409 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 DYDC1Q8WWB3 177 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 PTPRN2Q92932 1015 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms