RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 IGFBP6P24592 240 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 DDIT3P35638 169 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 BRCC3P46736 316 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 SOX4Q06945 474 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 PDXDC1Q6P996 788 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 ALKAL1Q6UXT8 129 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 ZPBP2Q6X784 338 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 GPR65Q8IYL9 337 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 LNX1Q8TBB1 728 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 PIK3R5Q8WYR1 880 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 SMG7Q92540 1137 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 PBXIP1Q96AQ6 731 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 C18orf25Q96B23 403 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 ZMAT2Q96NC0 199 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 CLSTN3Q9BQT9 956 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 PLEKHA4Q9H4M7 779 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 ZSCAN16Q9H4T2 348 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 LIMD1Q9UGP4 676 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 TBX20Q9UMR3 447 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 USTQ9Y2C2 406 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 SRPRBQ9Y5M8 271 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 PLXNA3P51805 1871 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 TMEM189-UBE2V1I3L0A0 370 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 ASGR2P07307 311 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 CXCL8P10145 99 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 TKTP29401 623 aaKnown RBP13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 GBP2P32456 591 aaPredicted RBP13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 SPAG1Q07617 926 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 MCL1Q07820 350 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 SIGLEC14Q08ET2 396 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 MTMR3Q13615 1198 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 XKR4Q5GH76 650 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 LIN9Q5TKA1 542 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 RRAGBQ5VZM2 374 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 OTOP3Q7RTS5 596 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 DYMQ7RTS9 669 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 ZDHHC14Q8IZN3 488 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 KRI1Q8N9T8 703 aaKnown RBP13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 C3orf58Q8NDZ4 430 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 CMASQ8NFW8 434 aaPredicted RBP13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 HDAC7Q8WUI4 952 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 FAM122AQ96E09 287 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 DDX27Q96GQ7 796 aaKnown RBP13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 MFSD14AQ96MC6 490 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 USP28Q96RU2 1077 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 CNTN3Q9P232 1028 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 SORCS3Q9UPU3 1222 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 NUB1Q9Y5A7 615 aa13.87□□□□□ -0.19
NPLOC4-213ENST00000573519 KCNE1P15382 129 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 FGFR3P22607 806 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 NMT1P30419 496 aaKnown RBP13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 OR1D2P34982 312 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 ZNF131P52739 623 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 STK38Q15208 465 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 SLC10A6Q3KNW5 377 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 FOXD4L6Q3SYB3 417 aaPredicted RBP13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 LILRA6Q6PI73 481 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 FOXD4L3Q6VB84 417 aaPredicted RBP13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 SUGP1Q8IWZ8 645 aaKnown RBP13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 STAMQ92783 540 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 PANK2Q9BZ23 570 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 HAPLN2Q9GZV7 340 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 SMOC2Q9H3U7 446 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 ZDHHC7Q9NXF8 308 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 STK17AQ9UEE5 414 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 CDY1Q9Y6F8 540 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 CLUHO75153 1309 aa13.86□□□□□ -0.19
NPLOC4-213ENST00000573519 MEFVO15553 781 aaPredicted RBP13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 ADAM12O43184 909 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 ZMYND10O75800 440 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 C1RP00736 705 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 CLTAP09496 248 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 SCP2P22307 547 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 MCM4P33991 863 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 TNFSF9P41273 254 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 PPP2R3AQ06190 1150 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 SLC39A14Q15043 492 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 ZC2HC1CQ53FD0 456 aaPredicted RBP13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 PPM1LQ5SGD2 360 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 CD300LGQ6UXG3 332 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 CYP26C1Q6V0L0 522 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 ANKS3Q6ZW76 656 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 SV2BQ7L1I2 683 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 ZNF707Q96C28 371 aaPredicted RBP13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 FAM212AQ96EL1 285 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 KIF12Q96FN5 646 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 MSTO1Q9BUK6 570 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 PRKD2Q9BZL6 878 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 WDR6Q9NNW5 1121 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 TFIP11Q9UBB9 837 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 TUBGCP4Q9UGJ1 667 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 FBXW11Q9UKB1 542 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 POLIQ9UNA4 740 aa13.85□□□□□ -0.19
NPLOC4-213ENST00000573519 MYH11P35749 1972 aa13.84□□□□□ -0.19
NPLOC4-213ENST00000573519 TULP1O00294 542 aaPredicted RBP13.84□□□□□ -0.19
NPLOC4-213ENST00000573519 C8AP07357 584 aa13.84□□□□□ -0.19
NPLOC4-213ENST00000573519 RPL9P32969 192 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-213ENST00000573519 PLA2G5P39877 138 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms