RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 FOSBP53539 338 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 ORC2Q13416 577 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 PUM1Q14671 1186 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 UPP1Q16831 310 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 ZBTB41Q5SVQ8 909 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 NT5DC1Q5TFE4 455 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 ATF7IP2Q5U623 682 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 CD300LGQ6UXG3 332 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 ANKS3Q6ZW76 656 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 APBB1IPQ7Z5R6 666 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 DCLK2Q8N568 766 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 IFT74Q96LB3 600 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 NELL2Q99435 816 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 LTB4R2Q9NPC1 389 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 AVENQ9NQS1 362 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 MRPS23Q9Y3D9 190 aaKnown RBP10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 PCDHGA2Q9Y5H1 932 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 SMIM28A0A1B0GU29 152 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 MED19A0JLT2 244 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 NCAM2O15394 837 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 RHOP08100 348 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 OR52Z1P0C646 297 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 CD72P21854 359 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 TKTP29401 623 aaKnown RBP10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 CSTF1Q05048 431 aaKnown RBP10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 SAFBQ15424 915 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 GLRA4Q5JXX5 417 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 SLC8B1Q6J4K2 584 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 C3orf58Q8NDZ4 430 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 ZNF461Q8TAF7 563 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 ATRIPQ8WXE1 791 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 ING5Q8WYH8 240 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 KIFAP3Q92845 792 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 CLDN23Q96B33 292 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 MCRS1Q96EZ8 462 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 DDX27Q96GQ7 796 aaKnown RBP10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 KIFC3Q9BVG8 833 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 POLD4Q9HCU8 107 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 DLL3Q9NYJ7 618 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 TNFSF13BQ9Y275 285 aa10.85□□□□□ -0.67
TRAPPC1-205ENST00000572656 ARID2Q68CP9 1835 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 ARHGEF37A1IGU5 675 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 I3L4J1 428 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 K7ERI5 159 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 ABLIM3O94929 683 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 PTPN2P17706 415 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 TARSP26639 723 aaKnown RBP10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 GRM5P41594 1212 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 BRCC3P46736 316 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 RPS9P46781 194 aaKnown RBP10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 YARSP54577 528 aaKnown RBP10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 ZNF174Q15697 407 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 SLC5A9Q2M3M2 681 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 XKR4Q5GH76 650 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 VARS2Q5ST30 1063 aaKnown RBP10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 HAUS3Q68CZ6 603 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 ALKAL1Q6UXT8 129 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 ZNF852Q6ZMS4 543 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 TPRG1Q6ZUI0 275 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 ZBTB44Q8NCP5 570 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 ELSPBP1Q96BH3 223 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 PLA2G2FQ9BZM2 168 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 BHMT2Q9H2M3 363 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 GOLGA2P5Q9HBQ8 144 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 TOPORSQ9NS56 1045 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 SLC38A7Q9NVC3 462 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 ZSCAN32Q9NX65 697 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 MRPS17Q9Y2R5 130 aaKnown RBP10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 FRYLO94915 3013 aa10.84□□□□□ -0.67
TRAPPC1-205ENST00000572656 PRRG1O14668 218 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 TBC1D4O60343 1298 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 MICAL2O94851 1124 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 LRG1P02750 347 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 ATF2P15336 505 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 CEBPBP17676 345 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 ELF1P32519 619 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 CCT6AP40227 531 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 NEK4P51957 841 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 ROR1Q01973 937 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 GUCY1B3Q02153 619 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 SOX4Q06945 474 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 FZD5Q13467 585 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 ECM1Q16610 540 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 RSPO4Q2I0M5 234 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 TANGO2Q6ICL3 276 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 POTEHQ6S545 545 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 TCEAL8Q8IYN2 117 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 GPR161Q8N6U8 529 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 NELL1Q92832 810 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 DNASE1L2Q92874 299 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 ACO2Q99798 780 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 CCDC94Q9BW85 323 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 FOXP1Q9H334 677 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 TMEM134Q9H6X4 195 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 PTPRHQ9HD43 1115 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 HEBP1Q9NRV9 189 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 NCDNQ9UBB6 729 aa10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 EP300Q09472 2414 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC1-205ENST00000572656 WDR27A2RRH5 827 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms