RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 DCLK3Q9C098 648 aa18.62■□□□□ 0.57
SCARF1-205ENST00000571272 ECE2O60344 883 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 TOM1O60784 492 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 DIAPH2O60879 1101 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 RRM1P23921 792 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 TRAF1Q13077 416 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 ALCAMQ13740 583 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 FAM102BQ5T8I3 360 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 CYP4F22Q6NT55 531 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 GBP7Q8N8V2 638 aaPredicted RBP18.61■□□□□ 0.57
SCARF1-205ENST00000571272 PARD3BQ8TEW8 1205 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 L3MBTL3Q96JM7 780 aaPredicted RBP18.61■□□□□ 0.57
SCARF1-205ENST00000571272 TRAIPQ9BWF2 469 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 RANBP17Q9H2T7 1088 aaKnown RBP18.61■□□□□ 0.57
SCARF1-205ENST00000571272 RXFP1Q9HBX9 757 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 NKIRAS1Q9NYS0 192 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 GSTTP1A0A1W2PQM5 241 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 TCP10L2B9ZVM9 353 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 GJC1P36383 396 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 SPP2Q13103 211 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 KIFAP3Q92845 792 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 KLHL14Q9P2G3 628 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 PRKAG3Q9UGI9 489 aa18.61■□□□□ 0.57
SCARF1-205ENST00000571272 RALAP11233 206 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 ALDH1B1P30837 517 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 YWHABP31946 246 aaKnown RBP18.6■□□□□ 0.57
SCARF1-205ENST00000571272 CLEC16AQ2KHT3 1053 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 PLA2G4FQ68DD2 849 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 AGBL1Q96MI9 1066 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 MRIQ9BWK5 157 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 RAB20Q9NX57 234 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 COL20A1Q9P218 1284 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 TMX2Q9Y320 296 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 UBR3Q6ZT12 1888 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 MROH7Q68CQ1 1323 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 CDC25CP30307 473 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 FOXN2P32314 431 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 MSH2P43246 934 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 QARSP47897 775 aaKnown RBP18.6■□□□□ 0.57
SCARF1-205ENST00000571272 UGCGQ16739 394 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 ERICH1Q86X53 443 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 FBXL13Q8NEE6 735 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 ATL2Q8NHH9 583 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 CCHCR1Q8TD31 782 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 C7orf43Q8WVR3 580 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 ARHGEF3Q9NR81 526 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 NOP53Q9NZM5 478 aaKnown RBP18.6■□□□□ 0.57
SCARF1-205ENST00000571272 DHX15O43143 795 aaKnown RBP18.6■□□□□ 0.57
SCARF1-205ENST00000571272 KIF1CO43896 1103 aaKnown RBP18.6■□□□□ 0.57
SCARF1-205ENST00000571272 MAPTP10636 758 aaKnown RBP18.6■□□□□ 0.57
SCARF1-205ENST00000571272 ALADP13716 330 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 PAX7P23759 505 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 CNGA1P29973 690 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 SSTR3P32745 418 aaPredicted RBP18.6■□□□□ 0.57
SCARF1-205ENST00000571272 CRYMQ14894 314 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 TMED2Q15363 201 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 ARHGEF18Q6ZSZ5 1173 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 ECHDC2Q86YB7 292 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 CHURC1Q8WUH1 139 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 IFT74Q96LB3 600 aa18.6■□□□□ 0.57
SCARF1-205ENST00000571272 RASA4BC9J798 803 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 RASA4O43374 803 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 SPAG7O75391 227 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 HP1BP3Q5SSJ5 553 aaPredicted RBP18.59■□□□□ 0.57
SCARF1-205ENST00000571272 TMEM63BQ5T3F8 832 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 ZNF365Q70YC5 407 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 ANKLE1Q8NAG6 615 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 GRK7Q8WTQ7 553 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 MAGEB18Q96M61 343 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 PITPNM3Q9BZ71 974 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 TMEM8AQ9HCN3 771 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 SERPINA10Q9UK55 444 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 ZNFX1Q9P2E3 1918 aaKnown RBP18.59■□□□□ 0.57
SCARF1-205ENST00000571272 CDH16O75309 829 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 TAC1P20366 129 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 SSR1P43307 286 aaKnown RBP18.59■□□□□ 0.57
SCARF1-205ENST00000571272 GPC3P51654 580 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 IZUMO3Q5VZ72 239 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 SV2AQ7L0J3 742 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 MCOLN2Q8IZK6 566 aa18.59■□□□□ 0.57
SCARF1-205ENST00000571272 DDX27Q96GQ7 796 aaKnown RBP18.59■□□□□ 0.57
SCARF1-205ENST00000571272 CLRN2A0PK11 232 aa18.58■□□□□ 0.57
SCARF1-205ENST00000571272 SOX10P56693 466 aa18.58■□□□□ 0.57
SCARF1-205ENST00000571272 ETNK1Q9HBU6 452 aa18.58■□□□□ 0.57
SCARF1-205ENST00000571272 TBX20Q9UMR3 447 aa18.58■□□□□ 0.57
SCARF1-205ENST00000571272 SCN9AQ15858 1988 aa18.58■□□□□ 0.57
SCARF1-205ENST00000571272 SKAP2O75563 359 aaPredicted RBP18.58■□□□□ 0.56
SCARF1-205ENST00000571272 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
SCARF1-205ENST00000571272 PDE6BP35913 854 aa18.58■□□□□ 0.56
SCARF1-205ENST00000571272 MTFR1Q15390 333 aa18.58■□□□□ 0.56
SCARF1-205ENST00000571272 XKR9Q5GH70 373 aa18.58■□□□□ 0.56
SCARF1-205ENST00000571272 ASRGL1Q7L266 308 aa18.58■□□□□ 0.56
SCARF1-205ENST00000571272 SPOCK2Q92563 424 aa18.58■□□□□ 0.56
SCARF1-205ENST00000571272 ADAM33Q9BZ11 813 aa18.58■□□□□ 0.56
SCARF1-205ENST00000571272 GLIS2Q9BZE0 524 aaPredicted RBP18.58■□□□□ 0.56
SCARF1-205ENST00000571272 USTQ9Y2C2 406 aa18.58■□□□□ 0.56
SCARF1-205ENST00000571272 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.58■□□□□ 0.56
SCARF1-205ENST00000571272 NFIBO00712 420 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 MAPK13O15264 365 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 PMM2O15305 246 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms