RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 PABPC1LQ4VXU2 614 aaKnown RBP15.78■□□□□ 0.12
CIITA-205ENST00000571186 MCPH1Q8NEM0 835 aa15.78■□□□□ 0.12
CIITA-205ENST00000571186 ING5Q8WYH8 240 aa15.78■□□□□ 0.12
CIITA-205ENST00000571186 ADPGKQ9BRR6 497 aa15.78■□□□□ 0.12
CIITA-205ENST00000571186 DDX23Q9BUQ8 820 aaKnown RBP15.78■□□□□ 0.12
CIITA-205ENST00000571186 PDZD7Q9H5P4 517 aa15.78■□□□□ 0.12
CIITA-205ENST00000571186 NCDNQ9UBB6 729 aa15.78■□□□□ 0.12
CIITA-205ENST00000571186 DNMT3BQ9UBC3 853 aaKnown RBP15.78■□□□□ 0.12
CIITA-205ENST00000571186 GDAQ9Y2T3 454 aa15.78■□□□□ 0.12
CIITA-205ENST00000571186 RALGAPA1Q6GYQ0 2036 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 PRKCBP05771 671 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 MAPK6Q16659 721 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 RSPO4Q2I0M5 234 aaPredicted RBP15.77■□□□□ 0.12
CIITA-205ENST00000571186 ZNF528Q3MIS6 628 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 VARS2Q5ST30 1063 aaKnown RBP15.77■□□□□ 0.12
CIITA-205ENST00000571186 ZBTB41Q5SVQ8 909 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 CDCA2Q69YH5 1023 aaPredicted RBP15.77■□□□□ 0.12
CIITA-205ENST00000571186 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.77■□□□□ 0.12
CIITA-205ENST00000571186 ATRIPQ8WXE1 791 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 MCRS1Q96EZ8 462 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 MTMR9Q96QG7 549 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 OSBPL6Q9BZF3 934 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 C2orf40Q9H1Z8 148 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 LTB4R2Q9NPC1 389 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 FBXO4Q9UKT5 387 aa15.77■□□□□ 0.12
CIITA-205ENST00000571186 MRPS23Q9Y3D9 190 aaKnown RBP15.77■□□□□ 0.12
CIITA-205ENST00000571186 B3GAT3O94766 335 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 SPATA31C1P0DKV0 1188 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 MCM7P33993 719 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 NBR1Q14596 966 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 NAB2Q15742 525 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 RSPO2Q6UXX9 243 aaPredicted RBP15.76■□□□□ 0.11
CIITA-205ENST00000571186 TPRG1Q6ZUI0 275 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 CATSPER3Q86XQ3 398 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 NPAS3Q8IXF0 933 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 BORCS6Q96GS4 357 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 NACC1Q96RE7 527 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 NELL2Q99435 816 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 TMEM60Q9H2L4 133 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 FOXP1Q9H334 677 aaPredicted RBP15.76■□□□□ 0.11
CIITA-205ENST00000571186 DLL3Q9NYJ7 618 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 KCNH3Q9ULD8 1083 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 SMC3Q9UQE7 1217 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 CDY1Q9Y6F8 540 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 CITO14578 2027 aa15.76■□□□□ 0.11
CIITA-205ENST00000571186 ACKR2O00590 384 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 SPTLC1O15269 473 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 NCAM2O15394 837 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 MED24O75448 989 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 FGFR3P22607 806 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 IGFBP6P24592 240 aaPredicted RBP15.75■□□□□ 0.11
CIITA-205ENST00000571186 MAGEA9P43362 315 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 GNL2Q13823 731 aaKnown RBP15.75■□□□□ 0.11
CIITA-205ENST00000571186 ZNF174Q15697 407 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 GLRA4Q5JXX5 417 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 EEF1DP3Q658K8 133 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 RTL10Q7L3V2 364 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 DEPTORQ8TB45 409 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 BSNDQ8WZ55 320 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 TUFT1Q9NNX1 390 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 MTRRQ9UBK8 725 aa15.75■□□□□ 0.11
CIITA-205ENST00000571186 ARHGEF35A5YM69 484 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 TRAPPC3O43617 180 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 RHOP08100 348 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 POU2F2P09086 479 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 TKTP29401 623 aaKnown RBP15.74■□□□□ 0.11
CIITA-205ENST00000571186 CLCNKBP51801 687 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 CUL4AQ13619 759 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 MCTP1Q6DN14 999 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 PADI6Q6TGC4 694 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 SECISBP2LQ93073 1101 aaKnown RBP15.74■□□□□ 0.11
CIITA-205ENST00000571186 PLA2G2FQ9BZM2 168 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 POLD4Q9HCU8 107 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 ZSCAN32Q9NX65 697 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 PCDHGA2Q9Y5H1 932 aa15.74■□□□□ 0.11
CIITA-205ENST00000571186 TMEM189-UBE2V1I3L0A0 370 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 I3L4J1 428 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 ECI2O75521 394 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 EDN1P05305 212 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 PTPN2P17706 415 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 CYP11B2P19099 503 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 U2AF2P26368 475 aaKnown RBP eCLIP15.73■□□□□ 0.11
CIITA-205ENST00000571186 TARSP26639 723 aaKnown RBP15.73■□□□□ 0.11
CIITA-205ENST00000571186 ELF1P32519 619 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 NAMPTP43490 491 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 TOB1P50616 345 aaPredicted RBP15.73■□□□□ 0.11
CIITA-205ENST00000571186 PPP2R5AQ15172 486 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 DCAF4L1Q3SXM0 396 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 TANGO2Q6ICL3 276 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 TSSK4Q6SA08 328 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 ZNF852Q6ZMS4 543 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 ANKS3Q6ZW76 656 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 CLDN23Q96B33 292 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 IFT74Q96LB3 600 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 POLR3CQ9BUI4 534 aaPredicted RBP15.73■□□□□ 0.11
CIITA-205ENST00000571186 CCDC113Q9H0I3 377 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 GOLGA2P5Q9HBQ8 144 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 HEBP1Q9NRV9 189 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 GDE1Q9NZC3 331 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms