RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CYP4A11Q02928 519 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 CEBPZQ03701 1054 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 NFIAQ12857 509 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 ORC1Q13415 861 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 GRIN2CQ14957 1233 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 R3HDM1Q15032 1099 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 POSTNQ15063 836 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 ABCB5Q2M3G0 1257 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 SLC35G1Q2M3R5 365 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 CTC1Q2NKJ3 1217 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 C15orf59Q2T9L4 293 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 KRT71Q3SY84 523 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 MMEL1Q495T6 779 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 SBK1Q52WX2 424 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 OXLD1Q5BKU9 147 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 KRBOX4Q5JUW0 171 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 C12orf60Q5U649 245 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 RAB12Q6IQ22 244 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 RCSD1Q6JBY9 416 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 TYW1BQ6NUM6 668 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 CDC42EP5Q6NZY7 148 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 LPCAT2Q7L5N7 544 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 GPR155Q7Z3F1 870 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 SRGAP1Q7Z6B7 1085 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 GALNT7Q86SF2 657 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 SGMS1Q86VZ5 419 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 SPATA2LQ8IUW3 424 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 ZFPM1Q8IX07 1006 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 CCDC13Q8IYE1 715 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 NUP93Q8N1F7 819 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 CRIPAKQ8N1N5 446 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 FBXL16Q8N461 479 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 GBP7Q8N8V2 638 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 TOR1AIP2Q8NFQ8 470 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 CTCFLQ8NI51 663 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 CCHCR1Q8TD31 782 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 COG1Q8WTW3 980 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 PIBF1Q8WXW3 757 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 DDX1Q92499 740 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 SHC3Q92529 594 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 ZNF516Q92618 1163 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 NKD1Q969G9 470 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 ZDHHC16Q969W1 377 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 NRBF2Q96F24 287 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 PGBD1Q96JS3 809 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 C8orf76Q96K31 380 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 C16orf45Q96MC5 204 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 MFSD14AQ96MC6 490 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 TMEM74Q96NL1 305 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 NUP88Q99567 741 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 TTC1Q99614 292 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 LLPHQ9BRT6 129 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 NOL10Q9BSC4 688 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 MENTQ9BUN1 341 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 PANK2Q9BZ23 570 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 TXLNGYQ9BZA5 131 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 NACAP1Q9BZK3 213 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 EDEM3Q9BZQ6 932 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 ZC3H12CQ9C0D7 883 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 COA1Q9GZY4 146 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 CPVLQ9H3G5 476 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 TRIT1Q9H3H1 467 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 SEMA4AQ9H3S1 761 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 CLSTN2Q9H4D0 955 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 WASH6PQ9NQA3 447 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 ZNF277Q9NRM2 450 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 IL17RBQ9NRM6 502 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 OLA1Q9NTK5 396 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 UBAP1Q9NZ09 502 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 SPATA7Q9P0W8 599 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 KIAA1468Q9P260 1216 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 IFT80Q9P2H3 777 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 ORC3Q9UBD5 711 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 EIF2B4Q9UI10 523 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 RASAL2Q9UJF2 1139 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 MOSPD1Q9UJG1 213 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 JRKLQ9Y4A0 524 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 PCDHB9Q9Y5E1 797 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 V9GYY5 206 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 FLT1P17948 1338 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 NID2Q14112 1375 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 ROBO3Q96MS0 1386 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 MGAMO43451 1857 aa3.84□□□□□ -1.8
SMG6-208ENST00000570874 PLXNA1Q9UIW2 1896 aa3.84□□□□□ -1.8
SMG6-208ENST00000570874 A0A087X0M5 115 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 A0A1B0GX30 115 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 SYCE3A1L190 88 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 H3BQV1 296 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 UBXN8O00124 270 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 SGK1O00141 431 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 TNFRSF10AO00220 468 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 EIF3FO00303 357 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 CACNB4O00305 520 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 WNT7AO00755 349 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 TPP1O14773 563 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 CAPN9O14815 690 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 TLR3O15455 904 aaKnown RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 PPIP5K2O43314 1243 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 TXNL1O43396 289 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 KDM1AO60341 852 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms