RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 NPTXRO95502 500 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 TDP2O95551 362 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 TOP3BO95985 862 aaKnown RBP11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 FGFR3P22607 806 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 CYP3A7P24462 503 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 VIPR2P41587 438 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 CCR2P41597 374 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 RAP1GAPP47736 663 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 QARSP47897 775 aaKnown RBP11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 MBTD1Q05BQ5 628 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 NCBP1Q09161 790 aaKnown RBP11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 FOXC1Q12948 553 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 EMC2Q15006 297 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 PLA2G2CQ5R387 149 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 DIEXFQ68CQ4 756 aaKnown RBP11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 PDXDC1Q6P996 788 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 WDR5BQ86VZ2 330 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 EXOC8Q8IYI6 725 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 ETNPPLQ8TBG4 499 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 BICD2Q8TD16 824 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 ZSWIM3Q96MP5 696 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 ADAM33Q9BZ11 813 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 CXCL16Q9H2A7 254 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 MTRRQ9UBK8 725 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 LHX6Q9UPM6 363 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 PPME1Q9Y570 386 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 CDY1Q9Y6F8 540 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 GCN1Q92616 2671 aaKnown RBP11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 NCANO14594 1321 aa11.6□□□□□ -0.55
CTDNEP1-202ENST00000570380 ARHGEF37A1IGU5 675 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 WDR27A2RRH5 827 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 TMEM8BA6NDV4 472 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 ARNTLO00327 626 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 PTGESO14684 152 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 PRPF3O43395 683 aaKnown RBP11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 HOXA6P31267 233 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 NOVA1P51513 510 aaKnown RBP11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 MLLT6P55198 1093 aaPredicted RBP11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 SPIRE1Q08AE8 756 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 ELAVL2Q12926 359 aaKnown RBP11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 LRRC32Q14392 662 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 NAB2Q15742 525 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 RNF43Q68DV7 783 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 KBTBD6Q86V97 674 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 TBCKQ8TEA7 893 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 GATA6Q92908 595 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 SMARCD2Q92925 531 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 CORO1BQ9BR76 489 aa11.59□□□□□ -0.55
CTDNEP1-202ENST00000570380 A0A1B0GUA9 196 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 ZNF263O14978 683 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 ZBTB39O15060 712 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 MOSPD3O75425 235 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 MICAL2O94851 1124 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 LRG1P02750 347 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 P4HBP07237 508 aaKnown RBP11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 SOX9P48436 509 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 RCAN1P53805 252 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 ZNF252P-AS1Q0IIN9 211 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 MXD4Q14582 209 aaPredicted RBP11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 SLC27A1Q6PCB7 646 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 DHX32Q7L7V1 743 aaKnown RBP11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 CACNA2D4Q7Z3S7 1137 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 MFSD6LQ8IWD5 586 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 DEPDC1BQ8WUY9 529 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 GAB3Q8WWW8 586 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 MTRQ99707 1265 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 XPNPEP1Q9NQW7 623 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 VPS54Q9P1Q0 977 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 VAV3Q9UKW4 847 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 BACE2Q9Y5Z0 518 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 LAMA5O15230 3695 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 LOC400499M0QZD8 3231 aa11.58□□□□□ -0.56
CTDNEP1-202ENST00000570380 NUP210Q8TEM1 1887 aaPredicted RBP11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 SLC38A8A6NNN8 435 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 ZNF197O14709 1029 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 DKC1O60832 514 aaKnown RBP eCLIP11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 RPP40O75818 363 aaKnown RBP11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 THP07101 528 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 YWHABP31946 246 aaKnown RBP11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 MPLP40238 635 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 PXNP49023 591 aaPredicted RBP11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 ROR1Q01973 937 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 POU5F1BQ06416 359 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 PPP2R5CQ13362 524 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 CAPSQ13938 189 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 XKR9Q5GH70 373 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 DGKKQ5KSL6 1271 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 TCEAL6Q6IPX3 200 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 TXNDC11Q6PKC3 985 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 CD300LGQ6UXG3 332 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 C4orf19Q8IY42 314 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 CCDC148Q8NFR7 591 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 ZNF461Q8TAF7 563 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 ASAP3Q8TDY4 903 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 TCEAL3Q969E4 200 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 RSPRY1Q96DX4 576 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 MSANTD3Q96H12 275 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms